Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq26 89.7 4e-13 seq434 82.4 6e-11 >seq26 Length=4002310 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | ||||||||||| || |||||||||||| || ||| | | Sbjct 1458180 AATGCAAATTTTTGTTAAAACATTGACTGGTAAAACCATTACCTTGGAGGTCGAAGCTTC 1458121 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 ||| || | | || ||||| ||||| ||||| |||||| | ||| || || Sbjct 1458120 AGATACCATCGAGAATGTCAAGGCTAAAATCCAAGATAAGGAAGGTATTCCCCCTGACCA 1458061 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 || | || |||||||| || |||||| | |||||| | ||| || | || ||||| Sbjct 1458060 GCAGCGTCTCATCTTTGCTGGAAAACAACTCGAAGATGGTAGAACCTTGTCAGACTACAA 1458001 Query 25214 TATTCAAAAGGAATCTACTCTTCA 25237 ||| || || ||||| || || || Sbjct 1458000 TATCCAGAAAGAATCCACACTACA 1457977 >seq434 Length=1254451 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170 ||||| |||||| || ||||||||| | || ||| |||||| |||| || |||| Sbjct 844008 TCAAGGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAACGACTGATTTTTG 843949 Query 25171 CGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACAATATTCAAAAGGAATC 25228 | ||||| || | |||||| || | ||| | | || |||||||||||||| || || Sbjct 843948 CTGGCAAGCAGCTCGAAGATGGTCGCACACTTT--CAGACTACAATATTCAAAAAGAGTC 843891 Query 25229 TACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| | || |||||| | ||||| || Sbjct 843890 CACACTTCATTTAGTTTTACGACTTCGAGGTGG 843858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410769539139230