Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq363 104 4e-17 seq241 104 4e-17 >seq363 Length=475187 Score = 104 bits (114), Expect = 4e-17 Identities = 142/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496 ||||||||| | | ||||| || || |||| ||| |||| | |||||||||||| ||| Sbjct 306312 ACTCATGATGATTTGTGGAATGCTGCAGAAATTCAGTTGGTTAAAGAAGGAAAAATTCAT 306253 Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556 |||| || |||||||||||||||| || || | |||||||| | | |||| || || Sbjct 306252 GGTTTCCTAAGAATGTATTGGGCTAAAAAAATTTTAGAATGGACCAAATCACCGGAGGAT 306193 Query 189557 GCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAAC 189616 || ||| || |||||| | || |||| ||| | || || |||||| || Sbjct 306192 GCCCTGAAGTACTCCATCTATCTAAATGACAAATACAGCATGGATGGACGGGATCCCAAT 306133 Query 189617 GGATACGTAGGT-TGTA 189632 ||||| || ||| |||| Sbjct 306132 GGATATGTGGGTATGTA 306116 >seq241 Length=911160 Score = 104 bits (114), Expect = 4e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 135667 TGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCTAAT 135726 ||||||||| | ||| |||| || || ||| || |||||||| | || || ||| Sbjct 429476 TGGGCGGATATCTTTCTTATCGCACCGTTAGACGCCAATACGTTGGGCAAGATGGCTTCA 429535 Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTC 135786 || || || |||||| ||||||||| | | | ||| |||||||| || ||| ||||| Sbjct 429536 GGCATCTGTGATAATATACTGACGTGTGTCGCAAGGGCCTGGGACACCTCCAAGCCACTA 429595 Query 135787 ATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAA 135838 | || || || || ||||| || |||||||||||||| ||||| |||| Sbjct 429596 CTCTTTTGCCCAGCCATGAACACCAGAATGTGGGAACATCCCATTACGGAAA 429647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923133964917800