Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq51 122 7e-23 >seq51 Length=2226466 Score = 122 bits (134), Expect = 7e-23 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055 |||||||||||| || ||| | ||||| |||| ||| ||||||||||||||| || || Sbjct 310122 CGTGACGTGAGCTATGAGACAAGTCAGCAGGGAGTAAGAGGCGATGTTAAACGGTACGCC 310063 Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTA 21115 |||||||||||| ||| ||||||||||| || || || | ||| || | ||||||| Sbjct 310062 GAGGCCCATGTCACCGGCTCTCTGGTACAGGTGACACGAGACCTCGCCACCGTCCACGTA 310003 Query 21116 AAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCA 21175 ||||| | ||| || ||||| ||||||||| | | | || | |||||||| Sbjct 310002 GAACTGGGCGAGCGAGTGGCAGGGAGGCAGAGCCATCAGGGGAATATCAACCGGGTTCCA 309943 Query 21176 CGCGC 21180 || || Sbjct 309942 CGAGC 309938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427747612383600