Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq30 86.0 6e-12 >seq30 Length=3281913 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 ||||| || || || ||||||||||| || || || |||||||| || || | ||| ||| Sbjct 991322 TACATCTCTGAATGGATGTTTTCTATGGCAATTTGGAAACCATAGAAGCAACGAGCCTCT 991263 Query 14014 GACCATTGTACCTCC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACT 14072 | |||||| || || | || ||||| | || || ||||| ||||| ||||| Sbjct 991262 GTAACTTGTACTTCTTGACTGAAC-CTTTCCACTAAATTCTCATTGACAATGCCATCTGA 991204 Query 14073 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT 14132 || || ||||||||||||| || || |||| || ||| || |||| | |||| Sbjct 991203 GGCAGCGAAAAATGCCAATACGTGCGAGATGAAGTGTTTCTCATCTGTGTTCAACTTTTG 991144 Query 14133 CCAATC 14138 ||| || Sbjct 991143 CCAGTC 991138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478556226049800