Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq26 82.4 6e-11 >seq26 Length=4002310 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 ||||| ||||| ||||| ||||| || | | ||| || ||||||| ||||||||||| Sbjct 1458211 GTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCGAGCTGTTTACCA 1458270 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || |||| | | |||||| ||| || | |||||||| || ||||| ||| Sbjct 1458271 GCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCTTTATCCTGGATTTTAGCTTTG 1458330 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | ||| ||| | ||| || | ||| || || || || || || || Sbjct 1458331 ACGTTCTCAATAGTGTCGGATGCCTCGACCTCTAGGGTGATAGTCTTTCCAGTCAAGGTC 1458390 Query 19025 TTGACAAAAATTTGCATT 19042 ||||||||||| |||||| Sbjct 1458391 TTGACAAAAATCTGCATT 1458408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414545288560330