Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq23 102 1e-16 >seq23 Length=2853459 Score = 102 bits (112), Expect = 1e-16 Identities = 143/203 (70%), Gaps = 12/203 (6%) Strand=Plus/Plus Query 164725 CATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACG------------TGGT 164772 ||| ||||| | ||||||||||| || ||| | || || || | |||| Sbjct 2809110 CATATTATTATATTTGATGAGATTGACGCTATCTGTAAGCAAAGAGGAAGTGTAGCTGGT 2809169 Query 164773 GATAATATTATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAA 164832 | || | |||||||| | || || |||||| | || ||||||| |||||||| ||| Sbjct 2809170 GCTACAGGTGTTCATGATACTGTAGTCAATCAGCTACTCGCTAAAATTGATGGTGTTGAA 2809229 Query 164833 TCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCT 164892 |||||||||||||| | | |||||||| || ||| || | || ||||||||| Sbjct 2809230 CAATTAAATAATATTTTGGTAATTGGTATGACAAATAGACGGGACATGATCGATGATGCT 2809289 Query 164893 TTATTACGACCTGGTCGATTAGA 164915 | || ||||||||| ||||||| Sbjct 2809290 CTTTTGCGACCTGGTAGATTAGA 2809312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595831443462000