Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 369 6e-98 seq30 212 1e-50 seq40 194 3e-45 seq78 190 3e-44 seq109 181 2e-41 seq362 163 4e-36 seq350 158 2e-34 seq58 154 2e-33 seq37 154 2e-33 seq110 152 8e-33 seq474 145 1e-30 seq504 123 4e-24 seq127 122 1e-23 seq682 116 6e-22 seq63 91.5 2e-14 >seq3 Length=8148774 Score = 369 bits (408), Expect = 6e-98 Identities = 578/833 (69%), Gaps = 9/833 (1%) Strand=Plus/Plus Query 21 AAGGAATTCATTGACTCTGACTTTCTTCACTACCTTTTGATAACGCTCATACACGTCTTT 80 ||| ||||| || || ||||| ||||||| || ||||| | | ||||| | || Sbjct 2336601 AAGAAATTCTTTTGTTCCAACTTTACTCACTACTTTCTGATAGTGGCCGTACACATGCTT 2336660 Query 81 GATATCAAAGTAGACATTGGACGGGAAAAGAGTAACCAAATCCATGTGAAACTTTTTTCT 140 |||| | ||||| |||||||| || |||| ||| |||||||| | || || ||| | Sbjct 2336661 GATAGCCAAGTAAACATTGGATGGAAAAATAGTCACCAAATCATCCCGGAATTTCTTTTT 2336720 Query 141 CTTAGAAATGTTGTCGACGTACTTAGGTAAGGTCGGATATTTCTTTGATTCCTTTACACA 200 || ||||| | || ||||||| ||| || || ||||| |||| | || | ||| || Sbjct 2336721 TTTGGAAATATACTCAACGTACTCAGGCAAAGTGGGATACTTCTCCAAATCTTCTACGCA 2336780 Query 201 ATCAATGAACAGTTTGTATAGTGACAAAACTCTGTCGAACTCAAGCGAATTGATAGGTTC 260 | || ||| | |||||| |||| || || || ||||||||||||| || || || Sbjct 2336781 GTGGATATACAAATGGTATAGAGACAGAATCCTATCAAACTCAAGCGAATCAATGGGCTC 2336840 Query 261 AAAAGTAACTTTNNNNNNNNNNNNNNNNNNNNNNNTGCTAATGACTACTTTCTTGGTATT 320 || | ||||| || |||| ||||||||||| ||| Sbjct 2336841 AATGGACACTTTAACTTTATCTTCGTCATTGTCATTGTTAATCACTACTTTCTTAGTAAC 2336900 Query 321 CTTTACCAATTCCGTGTAGAAAGATTTGTCTTGGTCGATAGCAAAATAGGGACGGAACGT 380 || || ||||||||||| || || |||| | ||||||||||| | |||||||| || Sbjct 2336901 CTCGACTAATTCCGTGTAAAATGACTTGTTACGATCGATAGCAAAGAAAGGACGGAATGT 2336960 Query 381 CTTTTCACAGATATCAAACGTGCCTGTCCCA---GCTTCGGATGCCTCCAAGTCACCCTC 437 |||||| || || ||||| | | | | |||||||| | ||||| | | | || Sbjct 2336961 CTTTTCGCAAATTTCAAATATTTTTTGACGACTGGCTTCGGAGACTTCCAAATTATCTTC 2337020 Query 438 AAAGTGCATAAGGTGGACGAAGTCATTCAAATGAACTTTCTCCTCA---AGAATATCGTC 494 ||| | ||| | ||| |||||||||||||||||||| | || ||| | | ||||||| Sbjct 2337021 AAAATACATCAAGTGAACGAAGTCATTCAAATGAACGGTTTCTTCAATCACATTATCGTC 2337080 Query 495 ACGCAAAATTCCCTTGTGATTTAACTTTAGGTAATTCAGCTTGTATAGATTAGATGATTT 554 ||| || ||||| | || || | |||||| ||||| || ||||| ||| || Sbjct 2337081 ---CAACATATTTTTGTGCTCGAATTTCAAGTAATTGAGCTTATAAAGATTGAATGGCTT 2337137 Query 555 TTCAATTTCACTGACTAGAAAACCATCTACAGTCTTGAAGATTTTCTCCAACAAATAATA 614 |||||||||||| || | ||| || ||||||||||| |||||||| | || |||||| || Sbjct 2337138 TTCAATTTCACTAACCAAAAATCCGTCTACAGTCTTAAAGATTTTTTTCAGCAAATAGTA 2337197 Query 615 AATTTTCTTTCTCCGTTTTTGGAtttttttCAAAGTCATTACGTAACTTAGTAGTTCTTT 674 || ||||| | |||||| ||||| | ||||| ||||| || | ||| | || ||| | Sbjct 2337198 AACTTTCTCCCCACGTTTTGGGATTCTCTTCAATGTCATCACTTCACTCATTATTTCCCT 2337257 Query 675 TCGTTTCTCGATAGGCTTCAAATCTAGATCATAATTGAACCATGTCAAAATTTCAATCAT 734 || ||| |||| ||| | ||| | ||| || | || | |||| || || ||||| Sbjct 2337258 ACGCCGCTCAATAGACTTGATATCCAAATCGTAGTCAAAGTACTTCAAGATCTCCATCAT 2337317 Query 735 ATAGCGCGCTACGCTATAATACCCTCTTAGCCGTTCCTGCTTGTAGTGTTGAGGATCATT 794 | | |||| |||| ||| || || | |||||| || ||| ||| ||| |||| Sbjct 2337318 ACAATGCGCCACGCCATAGAACATCCTCAACCGTTCGTGATTGAAGTATTGGAGATCGGC 2337377 Query 795 TTTAAAAATTCCTGAGGACAATTCCACGCAGTACCATAACGCAGTTGGTAGCG 847 ||| ||||| | || ||||| || ||||||||||| ||||| || | |||| Sbjct 2337378 TTTGAAAATGCACGAAGACAAGTCAACGCAGTACCACAACGCGGTAAGCAGCG 2337430 Score = 116 bits (128), Expect = 6e-22 Identities = 237/347 (68%), Gaps = 10/347 (3%) Strand=Plus/Minus Query 6026 TTACTGTACATCGTCACAAATGGCAAGATTAGCCGGGAAAGTATAGACGAATGTTTGGAA 6085 || || |||||| ||||| |||| | | ||| || ||| | ||||||||||| ||| Sbjct 2338625 TTGCTATACATCATCACAGATGGTATGGTTAATTCAGACAGTGTGGACGAATGTTTCGAA 2338566 Query 6086 TTGAATAAAGAAATAGATTATGAAATGGTTGTTTTCCATGCATTCAATGAAGACCCGGAA 6145 | || | | || ||||||||| || ||||| ||||| || || || | |||| Sbjct 2338565 CTCAACCAGTATATGCATTATGAAACCGTAGTTTTTCATGCCTTTCATCAAAATTTGGAA 2338506 Query 6146 AAAATCGACCTTTTAGTAGCTGCACCTTTCTTCAAGAGCCGTTGCATCGTTTATCACAAT 6205 | |||||||||| ||| || || ||||||||||| |||||||| || || |||| Sbjct 2338505 GACATCGACCTTTCAGTGGCATCATCTTTCTTCAAGGATCGTTGCATGGTCTACTGCAAT 2338446 Query 6206 ACCGAACTTTGTAACCGTACTCAT----ATTTCCAAGGAGTTTGATTATGACAAGATCAG 6261 | | |||||| || | | ||| ||| | | || || || || || |||| Sbjct 2338445 AACAAACTTT---ACGATTC-CATTGCAATTGGTGATAATTTCGAGTACGATAAAATCAA 2338390 Query 6262 TAGCGACAACTTCGCAGTTGAAATGCAACAACTT-ATGTCTTATATTAAATTGAAGTTCA 6320 | || ||||| || |||| | || || || | |||||| || |||||||||||| Sbjct 2338389 CATTGATAACTTTGCTTCTGAACAG-AATAATTTAACGTCTTACATCAAATTGAAGTTCC 2338331 Query 6321 TCAATAAATTCAAACGAGACGCTGATGTTTGGCGAGAAATTGAAAAA 6367 | || |||||| || | ||| ||| || | |||||| |||||| Sbjct 2338330 TGAAAAAATTCCAAAACAATGCTAATGCTTTGGAAGAAATCGAAAAA 2338284 >seq30 Length=3281913 Score = 212 bits (234), Expect = 1e-50 Identities = 207/267 (78%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | |||||| ||||||||||| || || |||||||| || ||| Sbjct 205538 GCCAAGCGCCATCGCAAAGTTCTTCGCGATAACATCCAGGGTATTACCAAGCCTGCCATC 205479 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||||||||| || || |||||| | ||||||||| |||| ||||||| | Sbjct 205478 CGCCGTCTGGCTCGTCGTGGAGGTGTGAAGCGTATTTCTGGATTGATCTACGAAGAGACT 205419 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | ||| | || || ||| ||| |||| ||| || || |||||| || Sbjct 205418 CGTGGTGTCCTCAAGGTATTTCTTGAGAACGTCATCCGTGACGCCGTCACCTATACTGAA 205359 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||||||| | ||||| || || ||||||| | ||||| |||||||| | ||||| Sbjct 205358 CACGCTAAAAGGAAGACCGTTACTGCCATGGACGTTGTCTACGCATTGAAGAGACAAGGA 205299 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | |||||||| || ||||| Sbjct 205298 CGTACTCTCTATGGTTTCGGCGGTTAA 205272 Score = 197 bits (218), Expect = 2e-46 Identities = 205/269 (76%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | |||||| ||||||||||| || || |||||||| || ||| Sbjct 226278 GCCAAGCGCCATCGCAAAGTTCTTCGCGATAACATCCAGGGTATTACCAAGCCTGCCATC 226219 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||||||||| || || |||||| | ||||| ||| |||| ||||||| | Sbjct 226218 CGCCGTCTGGCTCGTCGTGGAGGTGTGAAGCGTATTTCTGGTTTGATCTACGAAGAGACT 226159 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | ||| | || || ||| || |||| ||| || || |||||| || Sbjct 226158 CGTGGTGTCCTCAAGGTATTTCTTGAGAATGTCATCCGTGACGCCGTCACCTATACTGAA 226099 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||||||| | ||||| || || ||||||| | ||||| || ||||| | ||||| Sbjct 226098 CACGCTAAAAGGAAGACCGTTACTGCCATGGACGTTGTCTACGCGTTGAAGAGACAAGGA 226039 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATC 16701 |||| | || ||||| || ||||||| Sbjct 226038 CGTACTCTCTACGGTTTCGGCGGTTAATC 226010 Score = 185 bits (204), Expect = 1e-42 Identities = 203/270 (75%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | |||||| ||||||||||| || || |||||||| || ||| Sbjct 161974 GCCAAGCGTCATCGCAAAGTTCTTCGCGATAACATCCAGGGTATTACCAAGCCTGCCATC 161915 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||||||||| || || |||||| | ||||| ||| |||| ||||||| | Sbjct 161914 CGCCGTCTGGCTCGTCGTGGAGGTGTGAAGCGTATTTCTGGTTTGATCTACGAAGAGACT 161855 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | ||| | || || ||| || |||| ||| || || ||||| || Sbjct 161854 CGTGGTGTCCTCAAGGTATTTCTTGAGAATGTCATCCGTGACGCCGTCACTTATACTGAA 161795 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||||||| | ||||| ||||| ||||||| | || || || || ||| | ||||| Sbjct 161794 CACGCTAAAAGGAAGACCGTCACTGCCATGGACGTTGTTTACGCGTTAAAAAGACAAGGA 161735 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 || | | || || || || ||||| || Sbjct 161734 CGCACTCTGTACGGCTTCGGCGGTTAAACT 161705 >seq40 Length=1485311 Score = 194 bits (214), Expect = 3e-45 Identities = 203/267 (76%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||| |||||| | |||||| ||||||||||| || || |||||||| || ||| Sbjct 335415 GCCAAGCGTTATCGCAAAGTTCTTCGCGATAACATCCAGGGTATTACCAAGCCTGCCATC 335356 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | |||||||||||||||| || ||||||| | | ||||| ||| |||| ||||||| | Sbjct 335355 CACCGTCTGGCTCGTCGTGAAGGTGTCAAGCATATTTCTGGTTTGATCTACGAAGAGACT 335296 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | ||| | || || ||| ||| |||| ||| ||| || |||||| || Sbjct 335295 CGTGGTGTCCTCAAGGTATTTCTTGAGAACGTCATCCGTGACGCTATCACCTATACTGAA 335236 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 | ||||||| ||||| ||||| ||||||| | ||||| || ||||| | ||||| Sbjct 335235 CTCGCTAAAAAGAAGACCGTCACTGCCATGGACGTTGTCTACGCGTTGAAGAGACAAGGA 335176 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | |||||||| || ||||| Sbjct 335175 CGTACTCTCTATGGTTTCGGCGGTTAA 335149 >seq78 Length=1593723 Score = 190 bits (210), Expect = 3e-44 Identities = 205/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| ||||||||||| || || |||||||| || || Sbjct 1491207 GCCAAGCGCCATCGCAAGGTC-CTTCGTGATAACATCCAGGGTATAACCAAGCCGGCCAT 1491149 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||||||||| ||||| ||||| ||||||| || |||||||||||| Sbjct 1491148 CCGCCGTCTGGCTCGTCGTGGAGGAGTGAAGCGAATCTCTGGTCTGATCTATGAAGAGAC 1491089 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | ||||| ||| ||| |||| ||| || || ||||||||| Sbjct 1491088 CCGCGGTGTCCTCAAGGTATTCCTTGAGAACGTCATCCGTGACGCCGTCACCTATACCGA 1491029 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| ||||| ||||||| | ||||| ||| |||| | || || Sbjct 1491028 ACACGCCAAGAGGAAGACCGTCACTGCCATGGACGTTGTCTACGCACTGAAGAGGCAGGG 1490969 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 |||| | || ||||| || |||||| Sbjct 1490968 ACGTACTCTCTACGGTTTCGGCGGTTAAT 1490940 Score = 185 bits (204), Expect = 1e-42 Identities = 204/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| ||||||||||| || || |||||||| || || Sbjct 877415 GCCAAGCGCCATCGCAAGGTC-CTTCGTGATAACATCCAGGGTATAACCAAGCCGGCCAT 877357 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||||||||| ||||| ||||| ||||||| || |||||||||||| Sbjct 877356 CCGCCGTCTGGCTCGTCGTGGAGGAGTGAAGCGAATCTCTGGTCTGATCTATGAAGAGAC 877297 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | |||||| ||| ||| |||| ||| || || ||| ||||| Sbjct 877296 CCGCGGTGTCCTCAAGGTATTCCTCGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 877237 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| ||||| ||||||| | ||||| |||||||| | || || Sbjct 877236 ACACGCCAAGAGGAAGACCGTCACTGCCATGGACGTTGTCTACGCATTGAAGAGACAGGG 877177 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | || || || || |||||| Sbjct 877176 ACGCACTCTCTACGGATTCGGCGGTTAAT 877148 Score = 176 bits (194), Expect = 7e-40 Identities = 179/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| ||||||||||| || || |||||||| || || Sbjct 497820 GCCAAGCGCCATCGCAAGGTC-CTTCGTGATAACATCCAGGGTATTACCAAGCCGGCCAT 497762 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||| |||||||| || | ||||| | |||||||||||| Sbjct 497761 CCGCCGTCTGGCTCGCCGTGGAGGAGTCAAACGCATTTCTGGTCTAATCTATGAAGAGAC 497702 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | |||||| ||| ||| |||| ||| || || ||| ||||| Sbjct 497701 CCGTGGTGTCCTCAAGGTATTCCTCGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 497642 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662 ||||| || | ||||| ||||| ||||||| | ||||| |||||||| Sbjct 497641 ACACGCCAAGAGAAAGACCGTCACTGCCATGGACGTTGTCTACGCATTGAA 497591 Score = 170 bits (188), Expect = 3e-38 Identities = 178/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| ||||||||||| || || |||||||| || || Sbjct 304763 GCCAAGCGCCATCGCAAGGTC-CTTCGTGATAACATCCAGGGTATTACCAAGCCGGCCAT 304705 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||| |||||||| || | ||||| | |||||||||||| Sbjct 304704 CCGCCGTCTGGCTCGCCGTGGAGGAGTCAAACGCATTTCTGGTCTAATCTATGAAGAGAC 304645 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | |||||| ||| ||| |||| ||| || || ||| ||||| Sbjct 304644 CCGTGGTGTCCTCAAGGTATTCCTCGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 304585 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662 ||||| || | ||||| || || ||||||| | ||||| |||||||| Sbjct 304584 ACACGCCAAGAGGAAGACCGTGACTGCCATGGACGTTGTCTACGCATTGAA 304534 >seq109 Length=1464684 Score = 181 bits (200), Expect = 2e-41 Identities = 203/269 (75%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| | || ||||| ||||||||||| || || |||||||| || || Sbjct 417041 GCCAAGCGTCATCGCAAGGTC-CTTCGTGATAACATCCAGGGTATTACCAAGCCGGCCAT 416983 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||||||||| ||||| |||||| | ||||| | |||| ||||||| Sbjct 416982 CCGCCGTCTGGCTCGTCGTGGAGGAGTTAAGCGTATATCTGGTCTAATCTACGAAGAGAC 416923 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | ||||| ||| ||| |||| ||| ||| || ||| || || Sbjct 416922 CCGTGGTGTGCTCAAGGTATTCCTTGAGAACGTCATCCGTGACGCTGTCACCTACACTGA 416863 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| ||||| ||||||| | ||||| |||||||| | || || Sbjct 416862 ACACGCGAAGAGGAAGACCGTCACTGCCATGGACGTGGTCTACGCATTGAAGAGACAGGG 416803 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | || || || || |||||| Sbjct 416802 ACGCACTCTCTACGGCTTCGGCGGTTAAT 416774 >seq362 Length=962489 Score = 163 bits (180), Expect = 4e-36 Identities = 199/269 (74%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||| | | |||| ||||| || ||||| |||||||| ||||| ||||| Sbjct 374036 GCAAAGCGTCATCGGA-AGGTCTTGCGAGACAATATCCAGGGAATCACTAAGCCTGCTAT 373978 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| ||||||||||| || || ||||| | || ||||| |||| || |||| Sbjct 373977 TCGTCGTCTTGCTCGTCGTGGCGGCGTGAAGCGCATTTCAGGATTAATCTACGAGGAGAC 373918 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | ||| | ||||| ||| ||| || || || | ||||| || Sbjct 373917 TCGTGGTGTCCTAAAGGTTTTCCTAGAGAACGTCATTAGGGACGCAGTGACGTATACGGA 373858 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || || | ||||| |||||||||| || ||||||||||| Sbjct 373857 GCACGCCAAGAGGAAGACCGTTACGGCTATGGACGTCGTCTATGCGTTAAAACGTCAAGG 373798 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 ||| | | || || || || |||||| Sbjct 373797 CCGCACCCTCTACGGATTCGGCGGTTAAT 373769 Score = 161 bits (178), Expect = 2e-35 Identities = 194/261 (74%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||| | | |||| ||||| || ||||| |||||||| ||||| ||||| Sbjct 250800 GCGAAGCGTCATCGGA-AGGTCTTGCGAGACAATATCCAGGGAATCACTAAGCCTGCTAT 250742 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| ||||||||||| ||||| ||||| | || ||||| |||| || |||| Sbjct 250741 TCGTCGTCTTGCTCGTCGTGGCGGAGTAAAGCGCATTTCAGGATTAATCTACGAGGAGAC 250682 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | || ||||||| ||| ||| ||| || || | ||||| || Sbjct 250681 TCGTGGTGTCCTAAAAGTCTTCCTAGAGAACGTCATCAGGGACGCAGTGACGTATACGGA 250622 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || || | ||||| |||| |||||||| || ||||| || Sbjct 250621 GCACGCCAAGAGGAAGACCGTTACGGCTATGGACGTCGTGTATGCATTAAAGCGTCAGGG 250562 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 |||| | || || ||||| Sbjct 250561 TCGTACCTTGTACGGCTTTGG 250541 >seq350 Length=778331 Score = 158 bits (174), Expect = 2e-34 Identities = 191/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| |||| ||| || ||||||||||| || ||||| ||||| || ||| Sbjct 457237 GCCAAGCGTCACCGCAAGGTTCTCCGGGATAACATCCAGGGTATCACGAAGCCCGCAATC 457296 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| |||||||| ||||| ||||| ||||||| | |||| || || | Sbjct 457297 CGCCGTTTGGCCCGTCGTGGCGGAGTGAAGCGAATCTCTGGCCTCATCTACGAGGAAACC 457356 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| ||||| | || || ||| |||||| ||||| | || ||||| Sbjct 457357 CGTGGTGTACTGAAGGTGTTTCTTGAGAATATTATCCGGGATGCCGTAACTTACACCGAA 457416 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||||| | || || || |||||||||||| |||| |||||| | || | ||||| Sbjct 457417 CACGCTAAGAGGAAAACCGTGACCTCCATGGATGTCGTATATGCACTCAAGAGGCAAGGT 457476 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| | | ||||| || || Sbjct 457477 CGTACGTTGTATGGATTCGG 457496 >seq58 Length=2447934 Score = 154 bits (170), Expect = 2e-33 Identities = 190/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||||| | || || || ||||||||||| ||||| || || ||||| Sbjct 1862372 GCTAAGCGTCATCGCAAAGTGCTACGTGACAACATCCAAGGTATCACGAAACCCGCTATT 1862431 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || || |||||||| || || || ||||| | ||||| | |||||||||| | | Sbjct 1862432 CGCCGACTTGCTCGTCGAGGGGGTGTGAAGCGGATTTCTGGCCTCATCTATGAAGAAACT 1862491 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| |||| |||| ||| | | || |||| |||||| | || ||||| Sbjct 1862492 CGAGGTGTCCTGAAAGTCTTTCTCGAAAATGTCATCCGGGATGCTGTGACTTACACCGAA 1862551 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || |||||| | ||||| ||||| || ||||| | || || ||| | ||| | ||||| Sbjct 1862552 CATGCTAAAAGAAAGACCGTCACTTCTATGGACGTAGTTTACGCACTCAAAAGGCAAGGA 1862611 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| | || |||||||| Sbjct 1862612 CGTACCCTCTACGGTTTTGG 1862631 >seq37 Length=3181276 Score = 154 bits (170), Expect = 2e-33 Identities = 195/268 (73%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | |||||| || |||||||| || || ||||| || || || Sbjct 722874 GCCAAGCGCCATCGTAAGGTTCTTCGTGACAACATCCAGGGTATTACCAAACCCGCCATT 722933 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || ||||||||||| |||||||| | || || | |||| || |||| | Sbjct 722934 CGCCGTCTTGCCCGTCGTGGTGGTGTCAAGCGCATTTCAGGCCTCATCTACGAGGAGACT 722993 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| |||| | ||||| | | |||||||| |||||| | || |||||| Sbjct 722994 CGTGGTGTTCTGAAAGTGTTCCTTGAAAACGTTATCCGTGATGCCGTGACTTACACCGAG 723053 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || || | || || |||||| | ||||| | |||||||| | || | |||||| Sbjct 723054 CATGCCAAGAGGAAAACCGTCACCGCTATGGACGTGGTCTATGCCCTTAAGAGGCAAGGC 723113 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700 |||| |||| ||||| || |||||| Sbjct 723114 CGTACTCTTTACGGTTTCGGTGGTTAAT 723141 >seq110 Length=1182046 Score = 152 bits (168), Expect = 8e-33 Identities = 195/269 (72%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||| ||||||| | |||| | ||||||||||| || || |||||||| ||||| Sbjct 367318 AAGCGCCATCGCAAAGTTCTTTGCGATAACATCCAGGGTATGACCAAGCCTAAAATCCGC 367377 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||||||||||||||| || || |||||||| ||||| ||| |||| ||||||| || | Sbjct 367378 CGTCTGGCTCGTCGTGGAGGTGTTAAGCGTGTTTCTGGTTTGATCTACGAAGAGACTCAT 367437 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 ||| | ||| | || || |||| | | || | ||| || || ||||| || | Sbjct 367438 AGTGTACTTAAGGTATTTCTTAAGAACATCATTCGTGACGCCGTCACGTATACTGAATAT 367497 Query 16616 GCTAAACGTAAGACTGTCACCTCCA-----TGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||| | ||||| |||| ||| | | || ||||| |||||||| | ||| Sbjct 367498 GCTAAAAGGAAGACCGTCAGTGCCACGCTGTCAACATAGTCTACGCATTGAAGAGACAAA 367557 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| | ||||||||||| ||||| Sbjct 367558 GACGTACTCTCTATGGTTTTGGTGGTTAA 367586 >seq474 Length=1093548 Score = 145 bits (160), Expect = 1e-30 Identities = 188/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||||| | || || || |||||||| || ||||| || || || || Sbjct 3150 GCTAAGCGTCATCGCAAAGTGCTACGTGACAACATCCAGGGTATCACGAAACCCGCCATT 3209 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || || |||||||| || || || ||||| | ||||| | |||| ||||| | | Sbjct 3210 CGCCGACTTGCTCGTCGAGGGGGTGTGAAGCGGATTTCTGGCCTCATCTACGAAGAAACT 3269 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| |||| |||||||| | | || |||| ||||| | || || ||| Sbjct 3270 CGTGGTGTCCTGAAAGTCTTCCTCGAAAATGTCATCCGGGATGCCGTGACTTACACTGAG 3329 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || |||||| | ||||| ||||| || ||||| | || || ||| | ||| | ||||| Sbjct 3330 CATGCTAAAAGAAAGACCGTCACTTCTATGGACGTAGTTTACGCACTCAAAAGGCAAGGA 3389 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| | || |||||||| Sbjct 3390 CGTACCCTCTACGGTTTTGG 3409 >seq504 Length=221565 Score = 123 bits (136), Expect = 4e-24 Identities = 187/266 (70%), Gaps = 9/266 (3%) Strand=Plus/Minus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 |||| ||| ||| | |||||| |||||||| | | || |||||| | || ||||| Sbjct 179733 AAGCACCATGGCAAAGTTCTTCGCAATAACATCAAGGTTATTACCAAGTCTGCCATCCGC 179674 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||| | ||||||||||| || |||||| || | ||| || |||| ||||||| |||| Sbjct 179673 CGTTTAGCTCGTCGTGGAGGTGTCAAGTGTATTTCTTATTTAATCTACGAAGAGACTCGT 179614 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | || | ||| | || || ||| ||| |||| ||| || || |||||| || ||| Sbjct 179613 GGTG-TCCCAAGGTATTTCTTGAGAACGTCATCCGTGACGCCGTCACCTATACTGAACAC 179555 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 |||||| | ||||| ||||| |||| || | ||||||| | ||||| ||| Sbjct 179554 GCTAAAAGGAAGACCGTCACTGCCATTGA--------ACCCATTGAAGAGACAAGGACGT 179503 Query 16676 AAGATTTATGGTTTTGGAAGTTAATC 16701 | | |||| ||| || ||||||| Sbjct 179502 ACTCTCTATGATTTCAGAGGTTAATC 179477 >seq127 Length=1168159 Score = 122 bits (134), Expect = 1e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||| ||||||| | || ||| | |||| ||||| || || ||||||| | || Sbjct 584042 GCCAAGCTCCATCGCAAGGTC-CTTTGTGATATTATCCAGGGTATTACCAAGCTGGACAT 583984 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| || | |||||| |||| ||||||| || |||| ||||||| Sbjct 583983 CCGCCGTCTGGCTCGCTGTAGAGGAGTCCAGCGCATCTCTGGTCTGATCTACGAAGAGAC 583924 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| ||| | ||||| ||| ||| || | ||| || || ||| ||||| Sbjct 583923 CCGTGGTGTTCCCAAGGTATTCCTTGAGAACGTCATTCGTGAGGCCGTCACCTACACCGA 583864 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662 ||||| || | ||||| ||||| |||||| | ||||| | ||||| Sbjct 583863 ACACGCCAAGAGGAAGACCGTCACTGACATGGACGTAGTCTACGAGTTGAA 583813 >seq682 Length=127450 Score = 116 bits (128), Expect = 6e-22 Identities = 172/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||| |||| ||||| || || |||| |||||||| ||| Sbjct 41299 CGCGACAACATCCAGGGTATCACTAAGCTTGCTATTCGCTGTTTGGCCCGTCGTGGCGGA 41358 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||| | |||| || | ||||||||||| | || | ||| || ||| | || ||| Sbjct 41359 GTCAAAAGAATCTCCGGTCTCGTCTATGAAGAAACCCGGGGTGTATTAAAGGTTTTTCTC 41418 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| || | | || | ||||| ||||||| | || || ||||| Sbjct 41419 GAGAACGTCATTCGCAACGCAATGACGTATACAGAGCACGTCATGAAAAAAACCGTCACG 41478 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | ||| || ||||||| || || |||||||||||| || |||| |||||||| | Sbjct 41479 GCAATGTATGTCGTCTACGCGTTAAAACGTCAAGGCTGTTTACTTTACGGTTTTGGCGGA 41538 Query 16697 TAAT 16700 |||| Sbjct 41539 TAAT 41542 >seq63 Length=1189721 Score = 91.5 bits (100), Expect = 2e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 16436 AAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCG 16494 |||| |||||||| | |||| | || || ||||| || ||||| ||||| ||||| || Sbjct 77071 AAGCATCATCGCA-AGGTCTTGTGCGACAATATCCAGGGTATCACTAAGCCTGCTATTCG 77129 Query 16495 TCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCG 16554 ||| ||||| ||| ||||||||||||| | |||| || | || ||||||| | || Sbjct 77130 CCGTTTGGCTTGTCCTGGTGGAGTCAAGAGAATCTCCGGTCTCATCAATGAAGAAACCCG 77189 Query 16555 TGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCA 16614 || | || ||| | || || || | || || | |||| | || || ||||| Sbjct 77190 TGGTAAATTTAAGGTATTTCTTAAAAAAGTCATTCGCAATGCAGTGACTTACACAGAGCA 77249 Query 16615 CGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTA 16653 || ||| | || || || || || |||||||| | ||| Sbjct 77250 TGCCAAAAGAAAAACCGTTACGTCAATGGATATTGACTA 77288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070221598385