Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq64 89.7 6e-13 >seq64 Length=1863977 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 15054 AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCC 15113 |||| || ||||||||| || || | ||||||||||| || |||||| | | || Sbjct 1819196 AGATCGGTGACAAGTTTGCGTCGCGTCACGGTCAAAAGGGCACCTGTGGCATGCTGTACC 1819137 Query 15114 CCCAGGAAGACATGCCCTTTACC-GCGTCAGGCATGACGCCCGACATTATCATCAACCCC 15172 ||||| |||||||| || ||| ||| || || || || ||||| |||||||| ||| Sbjct 1819136 GACAGGAGGACATGCCGTTCACCTGCGAG-GGTATCACCCCGGACATCATCATCAATCCC 1819078 Query 15173 AACTGCATCCCGTCCCGCATGACCAT 15198 || ||| |||||||||||||| || Sbjct 1819077 CACGCCATTCCGTCCCGCATGACGAT 1819052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611350387132000