Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq434 109 1e-20 >seq434 Length=1254451 Score = 109 bits (120), Expect = 1e-20 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||||||| |||||||| |||| | |||| || || || |||||||| ||| ||| Sbjct 962573 ACCCCATGTCTCGAGTCTTCCCAAAAGTCACAAAGTGCACCTTCCACAAATATGGTGCTT 962632 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 | || | || | || | || || |||||| | |||||| |||| | |||||||||| Sbjct 962633 CCGGTACTGTGCAGAAATTGGACGGTCTCTGCGTACTCCCGCTGAACATCGTCAACGAGA 962692 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTCT 3481 |||||||| | ||||| ||||||||||||| Sbjct 962693 AGATCTACGTGTTCCTTTGGTTCTGGTTCT 962722 Score = 80.6 bits (88), Expect = 7e-12 Identities = 90/117 (77%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGA-AAACTA-CGAGGGACTCTGCA 3424 || ||||| ||||||||||| || || |||| ||||| ||| || |||||| Sbjct 956291 TGCACTTTCCACAAATACGGCCCCAGCGGTAG--TGGAGAAACTTTCGACGGTCTCTGCG 956348 Query 3425 TCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481 | |||||| |||| | ||||||||||||||||| | ||||| ||||||||||||| Sbjct 956349 TACTCCCGCTGAACATCGTCAACGAGAAGATCTATGTGTTCCTTTGGTTCTGGTTCT 956405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479256757500