Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq203 95.1 2e-14 >seq203 Length=886859 Score = 95.1 bits (104), Expect = 2e-14 Identities = 218/327 (67%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 || ||| |||||||| |||||||||| || | | |||| || ||||| || || Sbjct 356575 CTGCACTATCTCGGTACACAAGTTACTGCTTCTGATGGTGCCCAGATTTTGCTGATTCGA 356634 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 ||||||||| ||| ||| ||||| | ||| | ||| |||| | || | ||||| Sbjct 356635 CTTGCGGTTGCAGTGGTCTTTGTAAAGCATATAAGGCGTTCCAGTTTCAACTTGAGACTT 356694 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATCCCTTGAGACTC 205062 |||||| ||||||| | || || ||||||||| ||| | ||| ||| Sbjct 356695 CAGAATAGCCGTCCACAGCGTTCTGGCATCGACTTGCTTCTTGTATTT---TTGCCCCTC 356751 Query 205063 GT---ATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119 | || | ||||||| |||| |||| || | ||||| || || ||||| Sbjct 356752 TTCATATGTGGTGTACAATTTTTCAAACTCAGCGCCCCAAACGTCGGGCAATCCAGGACA 356811 Query 205120 TTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | |||||||||||| ||| |||| | | || | | || || | ||| |||| ||| Sbjct 356812 CTCTTTGGGACACATGAGACTCCACTTTTCATTATTTAAAACTCTTTGCATGAACAAGTC 356871 Query 205180 GCTGATCCACAGGCCGTAAAACAGATC 205206 ||||||||| ||||||| ||||| Sbjct 356872 TGGGATCCACAGAGCGTAAAATAGATC 356898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795101079749200