Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq30 102 1e-16 seq2 82.4 9e-11 >seq30 Length=3281913 Score = 102 bits (112), Expect = 1e-16 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||| ||||||||||| || ||||||||| ||| || ||||||||||||| || || Sbjct 991668 TCATCGCGAGAGATGAGTTCGTTACTGAAGGTAAGACCCGGCATGAGTCCTCGCTTTTTC 991609 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCG 119636 |||||||| || || |||||| ||| || ||||| || || || |||||||| Sbjct 991608 AGCCAAAAAATAGCTGCAAAACTGCCACTGAAAAAGATACCTTCGACTGCAGCGAAAGCA 991549 Query 119637 AATAGACGCTCAGCAAA---AGGTCGAGACTTGTCGAACCACTTGAGAGCCCAGTTGGCC 119693 | | ||| || ||||| || | ||| | ||| ||||||||||||||||| Sbjct 991548 ATAACACGTTCGGCAAATGTAGCGCTCTCATTGCTAATCCAGTTGAGAGCCCAGTTGGCT 991489 Query 119694 TT 119695 || Sbjct 991488 TT 991487 >seq2 Length=6207162 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 110328 GGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTG 110387 || ||||| | || || |||||||||||| ||||| ||| |||| |||| ||| Sbjct 5349473 GGAGTATTGTACGATCTCAGTACACAAGTTGCTGCTCTTGATGGTGCCCAGATTCTGCTG 5349532 Query 110388 ATTCGA-TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCT 110446 |||||| ||| || ||||| ||||| || |||||||| || | ||||||||| || Sbjct 5349533 ATTCGACTTTCGA-TTGCAGTGGTCCTTGTAAAGCATGTACGGCATTCCAGTTTCCACCT 5349591 Query 110447 GTGACTTGAGAATGGCCTTCCA 110468 | ||||| || || ||| |||| Sbjct 5349592 GAGACTTCAGGATCGCCGTCCA 5349613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588935912821000