Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq27 109 7e-19 >seq27 Length=2928630 Score = 109 bits (120), Expect = 7e-19 Identities = 468/730 (64%), Gaps = 10/730 (1%) Strand=Plus/Minus Query 197026 TCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGA 197085 || || ||||| ||||| ||||||||||| || ||| | |||| || || || || Sbjct 1703947 TCTTCTTCGCTGAAGCCAGTACCGATCTTGCATATGCTCTGGTACTCCTCATTTTCTTGA 1703888 Query 197086 TTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAG 197145 | |||||| || || || || ||||||| || || || | || || || || | Sbjct 1703887 TCGTAACAAGCCAGCAAAAAGCCGCCGTAAGTACCGGTACGTTTGCCTTTGCCTATGTAA 1703828 Query 197146 CCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGT 197205 || || || || || || || | || || | || ||||| | || || || |||||| Sbjct 1703827 CCACCAATTACTACGAGGTCTAAGGTATCTCCAACACCTTCTAGATAGTCCTTTTTCAGT 1703768 Query 197206 TTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTG 197265 || ||||| | | || | |||||| |||||||| || || | | || || |||||| Sbjct 1703767 TTAAGCCAATTACGCGAGCGCTTGGCTATCTCGTATGTAGCTTCTTTTTCTAGAGTCTTG 1703708 Query 197266 ATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTGAATGTCTTCC 197325 ||||| | || ||||| | | ||| | | || | | ||| ||| | || ||| Sbjct 1703707 ATCATTAGACCTTCGCACTGATTCTTGATCGACTCATCTAGAAAATCTTGTACCTCGTCC 1703648 Query 197326 GGTTTGTTAGACATCATATCTCGCGCGAAGATAAATTGTCCCTCCACCTCCGTAAAACAA 197385 |||||| || | | ||||| ||| ||||| || || ||||| Sbjct 1703647 ATCGTGTTAGCGTCCAAACTTTTGGCGAAAGCCCATTCACCCTCGACTTCTTTAAAATTT 1703588 Query 197386 CTCCTCATAAGTTC-CCTCCTCTCTCTGAAGCTCTTGTTGACCTGAGACACTCCGTTCAT 197444 | | | | ||| | | | ||| | || || | ||| || | || || | Sbjct 1703587 GCCTTGAGTACTTCACGACGTTTCT-TAAATGGCTCCTCAACCATAGCCGTACCATTGAA 1703529 Query 197445 GTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATC 197504 ||||| | ||||| || |||||||| || || |||| || |||| || | || Sbjct 1703528 ATACAATAAATCAAATATGAAAACGCACACTTGTACTTTTATTTCAGCTTCGTTTGCGTC 1703469 Query 197505 TTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAACGTCCCA 197564 |||||||||| || ||| ||| || ||||| ||||| || || || |||||| Sbjct 1703468 CTTACGTTTTCGCGTACTTAGCACTTGGAATGGAAGAATCTGTTTTTTTTCCTTGTCCCA 1703409 Query 197565 AGCAACTGCCTCAGCGTCCAAGATGAAAG-ACTTCACTCC--CTCGTTGATCGATTGGGG 197621 |||||| || || || ||||| | || ||| ||| | | | ||| || | || Sbjct 1703408 AGCAACAGCTTC-GCAGTCAAGAACACAGCTCTTGACTTCAGCACCTTG--CGTGTTAGG 1703352 Query 197622 AAGCCTATTGATTATGTCGGGGTACTT-CTCGGTGTTATTTTCAGAGTTGCGGCTAAAAA 197680 | | ||||||||||| || || || ||| ||||| | ||| ||| | ||| | | Sbjct 1703351 TATTCGTTTGATTATGTCAGGATATTTGCTC-GTGTTGTCTTCCTGGTTTCTACTATATA 1703293 Query 197681 TTCTAATCTTCCCTCCCTCCATGTAGTGAATCTGAGCCCTCTCTCCGTCATACTTGTACT 197740 || | | || |||| | | |||||| || || | ||| || ||||||||||||| Sbjct 1703292 TTTTCACTGAGCCGTCCTCAAGGAGGTGAATTTGTGCTCGCTCGCCATCATACTTGTACT 1703233 Query 197741 CGCAAGAAAA 197750 | || | ||| Sbjct 1703232 CACACGTAAA 1703223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676683540091600