Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq203 113 2e-20 >seq203 Length=886859 Score = 113 bits (124), Expect = 2e-20 Identities = 208/303 (69%), Gaps = 4/303 (1%) Strand=Plus/Plus Query 25999 ATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGC 26058 ||| ||||||||||| | ||| ||||| | ||| | |||||||| || || || || || Sbjct 356991 ATTTTTTTTTAGATCAAGGAATTCAAATACATCGGCATGCCATGGCTCCAAGTAAATGGC 357050 Query 26059 AAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 ||| ||| ||| || || || ||||| || || | || || | |||||||| Sbjct 357051 AAATGCCCCTGGTCTCTTGTTACCTCCCTGATCAACATAGCAGGCTGTATTGTTGAAAAC 357110 Query 26119 TTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGT 26178 | | | |||||||||||| ||| |||||| || || || | | ||| |||| || || Sbjct 357111 TCTTAGCATTGGAACTAACCCATTTGAAATACCATTGGTACCAGCAATTTTGGTGCCAGT 357170 Query 26179 CGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA 26238 || | ||| | ||| || | ||| || || || || |||| ||| | ||||| Sbjct 357171 CGCACGAATGTTGTGTACACTGAGACCAATGCCTCCTGCTGATTTACTAATTACGGCACA 357230 Query 26239 --ATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAA 26296 | | ||| ||||| |||||||||| || || || || ||||| || |||||| Sbjct 357231 TCTTTTTAAA--GTATCAAAAATTCCTTCGATACTGTCGTCTGTCATTGTTAGCAAAAAA 357288 Query 26297 CAA 26299 ||| Sbjct 357289 CAA 357291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253023208028375