Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq51 91.5 2e-13 seq362 86.0 8e-12 >seq51 Length=2226466 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171622 TGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGG 171681 ||| |||||| ||| ||||| || | ||| | ||| || | ||| || || ||||| Sbjct 126690 TGGTTTATTAGAGGCTCAACAAATGCCAAAGAGTTATCAGAGAAAGGCGTCAACATTTGG 126749 Query 171682 AATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAGGT 171741 ||| |||||||| |||| |||||| || || | ||| | ||| ||||||| Sbjct 126750 GATGCCAATGGTTCACGTGCATTTTTGGACAATCTTGGCCTAACTAACAGAGAAGAAGGA 126809 Query 171742 GATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACTGT 171801 ||||||||||| | ||||| ||||| ||| ||||| || || | ||| | ||| Sbjct 126810 GATTTAGGTCCTGTATATGGCTTTCAGTGGCGACATTTTGGCGCCAAGTATGTGGACATG 126869 Query 171802 TATACAGATTACACAGGACAAGG 171824 | || |||||||| || ||||| Sbjct 126870 CACACGGATTACACTGGCCAAGG 126892 >seq362 Length=962489 Score = 86.0 bits (94), Expect = 8e-12 Identities = 157/223 (70%), Gaps = 9/223 (4%) Strand=Plus/Minus Query 192424 TTTATACTTCTATGGTTAAACAAGCCATTGGGTTTATTCCTTGCCA----CAACTTAAAA 192479 |||| | | |||||| ||||||||||| |||| ||| | || | | | || | | Sbjct 598697 TTTAGAGTGCTATGGGAAAACAAGCCAT-GGGTGTATACATTACTAACTTCCACGTGCGA 598639 Query 192480 ACGGAAACAGTCTCTCATACATTAAATTATCCACAAAAACCACTTGTTACCAC-AGATAT 192538 | ||| || || |||| | | ||||||| || ||||||||||||||||| |||| | Sbjct 598638 ATGGACACGCTCGCTCACGTACTGTATTATCCTCACAAACCACTTGTTACCACCAGATCT 598579 Query 192539 -TGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAG 192597 || || || | | | ||| |||| || |||||| ||| ||| || || || Sbjct 598578 ATGGAATATCTGAGGT-TCAGAGAATTA-CCTGCTGGTATCAATAGTATCGTAGCCATTT 598521 Query 192598 CTTGCTATACTGGCTATAACCAAGAAGACAGTATTATTTTAAA 192640 ||||| |||||||| || |||||||||||| ||||||| || Sbjct 598520 TATGCTACACTGGCTACAATCAAGAAGACAGTGTTATTTTGAA 598478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628488420595200