Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq363 95.1 2e-14 seq241 86.0 1e-11 >seq363 Length=475187 Score = 95.1 bits (104), Expect = 2e-14 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 183025 TGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 183084 |||||||| || |||| ||| || | | |||||||||||| ||| |||| || ||||| Sbjct 306297 TGGAATGCTGCAGAAATTCAGTTGGTTAAAGAAGGAAAAATTCATGGTTTCCTAAGAATG 306238 Query 183085 TACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGT 183144 || ||||||||||| || | |||||||| | | | ||||| ||||| ||| || Sbjct 306237 TATTGGGCTAAAAAAATTTTAGAATGGACCAAATCACCGGAGGATGCCCTGAAGTACTCC 306178 Query 183145 ATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGT-TG 183203 |||||| | || | || ||| | || || |||||| || ||||| || ||| || Sbjct 306177 ATCTATCTAAATGACAAATACAGCATGGATGGACGGGATCCCAATGGATATGTGGGTATG 306118 Query 183204 TA 183205 || Sbjct 306117 TA 306116 >seq241 Length=911160 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 143034 TGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCCAAC 143093 ||||||||| | |||||||| || || ||| || |||||||| | || || || Sbjct 429476 TGGGCGGATATCTTTCTTATCGCACCGTTAGACGCCAATACGTTGGGCAAGATGGCTTCA 429535 Query 143094 GGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACCTCTT 143153 || || || |||||| |||| || | | | | ||| |||||||| | || || || Sbjct 429536 GGCATCTGTGATAATATACTGACGTGTGTCGCAAGGGCCTGGGACACCTCCAAGCCACTA 429595 Query 143154 ATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTACAGAAA 143205 | ||||| || || ||||| | | |||||||||||||| ||||| |||| Sbjct 429596 CTCTTTTGCCCAGCCATGAACACCAGAATGTGGGAACATCCCATTACGGAAA 429647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903349711575200