Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq1901 132 7e-26 >seq1901 Length=19931 Score = 132 bits (146), Expect = 7e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 140508 AATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTTTAAAAGATCAACGCGGG 140567 || ||||||||||| ||||| | | ||||| | ||| | ||||||||||| | || Sbjct 8988 AACTTTTGTTTAGGCAAACATTTGGCCAGTGAGAGTGATTTGCTAAAAGATCAAAGAGGA 9047 Query 140568 TCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGGTAAACCGTCT 140627 ||||| || || |||||||| ||||| | | || || |||||| | || ||||| || Sbjct 9048 TCTCCTGCTTACATTTCTCCAGATGTATTGTGTGGAAAGCCATATCTTGGAAAACCTTCA 9107 Query 140628 GATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAATTTCCATTTTAT 140687 || |||||||| | || || ||||||||| ||||| | |||||||||||| |||||| Sbjct 9108 GACATGTGGGCTTTAGGGGTTGTATTGTATACAATGTTATATGGGCAATTTCCGTTTTAT 9167 Query 140688 GAT 140690 ||| Sbjct 9168 GAT 9170 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 127420 AGAACAGCGAGGATCACCGGCATACATCTCCCCAGAAGTTATATCAGGTAAAAAATATTT 127479 ||| || ||||||| || || ||||| || ||||| || | | || || |||| | Sbjct 9035 AGATCAAAGAGGATCTCCTGCTTACATTTCTCCAGATGTATTGTGTGGAAAGCCATATCT 9094 Query 127480 AGCAAAACCGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTACGGACA 127539 | |||||| ||||| | |||||| |||| ||| | || ||||||||| | || || || Sbjct 9095 TGGAAAACCTTCAGACATGTGGGCTTTAGGGGTTGTATTGTATACAATGTTATATGGGCA 9154 Query 127540 ATTTCCATTTTATGACTCTAAACCAAAAGAATTGTTTAGAAAAATTAAAGC 127590 |||||| |||||||| ||| || | | |||| |||| ||||||||||| Sbjct 9155 ATTTCCGTTTTATGATAGTAATCCCACACAATTATTTAATAAAATTAAAGC 9205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704534444360400