Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq51 131 2e-25 >seq51 Length=2226466 Score = 131 bits (144), Expect = 2e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 147270 GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||||||||| |||| ||||||| | |||||||||||||||||| || || || || || Sbjct 309715 GTCCACGTATTTGGCGCCAAAGTATCGCCACTGGAAGCCGTACACGGGGCCAAGATCTCC 309656 Query 147330 GGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCA 147389 || |||| || |||||| | || || || |||| ||| ||||||||| Sbjct 309655 TTCCTCTCTGCCCGTGAAGCCGCAGATGTCCAGGAATTCCCGGGATGCGTTGGCGTCCCA 309596 Query 147390 GATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAG 147449 ||| | || |||||||| || || || | || || ||||| | ||||||||||| Sbjct 309595 GATTTTAATACCTTTGGCGGACAGTTCTTTGGCGTTGGTCGAGCCTCTGATGAACCAGAA 309536 Query 147450 CAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 147504 ||||||||| || || | ||||||||| | ||| || ||||| ||||| ||| Sbjct 309535 CAGCTCCTCGGCCACTCCGCGCCAAAAGACGCGCTTCGTCGTCAGTAGGGGAAAC 309481 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 147013 GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTC 147072 || ||||| ||||| ||| ||||| || || || || ||||||||||| || | ||| Sbjct 310100 GTCAGCAGGGAGTAAGAGGCGATGTTAAACGGTACGCCGAGGCCCATGTCACCGGCTCTC 310041 Query 147073 TGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCAC 147132 |||||||| || ||||||| ||| || || ||||||| |||||| || |||||| Sbjct 310040 TGGTACAGGTGACACGAGACCTCGCCACCGTCCACGTAGAACTGGGCGAGCGAGTGGCAG 309981 Query 147133 GGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 || ||||| ||||| ||| | || | |||||||| Sbjct 309980 GGAGGCAGAGCCATCAGGGGAATATCAACCGGGTTCCA 309943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583448286348000