Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq30 91.5 5e-13 >seq30 Length=3281913 Score = 91.5 bits (100), Expect = 5e-13 Identities = 94/122 (77%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 ||||| |||| |||||||| | || || || ||||| ||| || | || || ||| | Sbjct 991550 GCTTTCGCTGCAGTCGAAGGTATCTTTTTCAGTGGCAGTTTT-GCAGCTATTTTTTGGCT 991608 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||||||||| ||||| |||| ||||| ||||| ||||||||||| ||| ||| || || Sbjct 991609 GAAAAAGCGAGGACTCATGCCGGGTCTTACCTTCAGTAACGAACTCATCTCTCGCGATGA 991668 Query 443838 GG 443839 || Sbjct 991669 GG 991670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588225191228025