Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4393 221 4e-52 seq26 181 3e-40 seq434 172 2e-37 seq350 140 1e-27 seq85 114 4e-20 seq89 100 9e-16 seq353 96.9 1e-14 seq44 96.9 1e-14 >seq4393 Length=1805 Score = 221 bits (244), Expect = 4e-52 Identities = 190/235 (81%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | || || |||||||| || ||||||||||||||||| |||| Sbjct 908 TTTGCATACCACCACGAAGTCGGAGTACAAGATGGAGTGTAGACTCTTTTTGAATGTTAT 967 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||| ||||||||||| || ||||| ||||| || || | ||| ||||||| Sbjct 968 AGTCTGAAAGTGTACGCCCATCTTCGAGCTGTTTACCAGCGAAAATCAAACGCTGCTGAT 1027 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || |||||||||||||||||||||||||| ||||| ||||||| || || | Sbjct 1028 CGGGAGGGATACCTTCTTTATCCTGAATTTTAGCTTTGACATTCTCAATCGTGTCGGAGG 1087 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || | ||| || || || || ||||| |||||||| ||||| Sbjct 1088 CCTCGACTTCTAGAGTGATTGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCAT 1142 Score = 210 bits (232), Expect = 7e-49 Identities = 185/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | || || |||||||| || ||||| ||||||||||||||||| || Sbjct 1368 CATGCCACCACGAAGTCGAAGCACAAGATGGAGTGTAGATTCTTTTTGAATATTATAGTC 1427 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||| ||||||||||| || ||||| ||||| || || | ||| |||||||| || Sbjct 1428 TGAAAGTGTACGCCCATCTTCGAGCTGTTTACCAGCGAAAATCAAACGCTGCTGATCTGG 1487 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || ||||| || || ||||| ||||| ||||| ||||||| || || | ||| Sbjct 1488 AGGGATACCCTCTTTGTCTTGGATTTTTGCTTTGACATTTTCAATCGTGTCTGAGGCTTC 1547 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || |||| ||| ||||| ||||| ||||| |||||||| ||||| Sbjct 1548 GACTTCTAGCGTAATTGTTTTTCCTGTTAGGGTTTTAACAAAAATTTGCAT 1598 Score = 196 bits (216), Expect = 1e-44 Identities = 182/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || || |||||||| ||||||||||| || ||||| |||||||| Sbjct 456 CATACCACCACGAAGTCGGAGTACAAGATGCAGAGTAGACTCCTTCTGAATGTTATAATC 515 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || |||||||| || || || || ||||| || || | ||| |||||||| || Sbjct 516 AGACAGAGTACGCCCATCCTCGAGCTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGG 575 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || |||||||| || |||||||| || || ||||| ||||| | ||| || | ||| Sbjct 576 TGGGATACCTTCTTTGTCTTGAATTTTGGCCTTCACATTTTCAATTGTATCGGAAGCTTC 635 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| |||||||| | || ||||| || || || || ||||| |||||||| Sbjct 636 AACCTCAAGTGTGATGGTTTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 686 Score = 188 bits (208), Expect = 2e-42 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 || ||||| || ||||||||||||||||| || || || || ||||| || |||||||| Sbjct 706 ACGAGATGTAGGGTAGACTCTTTTTGAATGTTGTAGTCCGACAATGTACGTCCATCTTCG 765 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 ||||| || |||||||| || | |||||||||||| ||||| || || ||||| ||||| Sbjct 766 AGTTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGAGGGATACCCTCTTTGTCCTGG 825 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 ||||| ||||| ||||| ||||| | ||||| | |||||||| ||||| | || || Sbjct 826 ATTTTTGCTTTGACATTTTCAATTGTGTCAGAGGCCTCAACTTCCAGTGTGATGGTTTTG 885 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||||||||| || ||||| Sbjct 886 CCAGTAAGAGTTTTTACAAAGATTTGCAT 914 Score = 181 bits (200), Expect = 3e-40 Identities = 166/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 140528 AACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTC 140587 ||| | ||| ||||| |||||||| ||||| || || || || ||||| || |||||||| Sbjct 249 AACTAAATGGAGAGTTGACTCTTTCTGAATGTTGTAGTCCGACAATGTACGTCCATCTTC 308 Query 140588 AAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG 140647 ||||| || |||||||| || | |||||||||||| ||||| || |||||||| || || Sbjct 309 GAGTTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGAGGTATGCCTTCTTTGTCTTG 368 Query 140648 AATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTT 140707 ||||||||| || || || ||||||| ||| || | || ||||| || || | ||| || Sbjct 369 AATTTTAGCCTTGACGTTTTCAATCGTATCTGAGGCCTCGACTTCTAGGGTTATTGTTTT 428 Query 140708 TCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| ||||| || || |||||||| Sbjct 429 GCCAGTTAGAGTTTTAACGAAGATCTGCAT 458 Score = 176 bits (194), Expect = 1e-38 Identities = 167/212 (79%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| ||| |||||| || ||||| || ||||| ||||| || || | ||| || |||||| Sbjct 20 AGACCAA-ATGAAGGGTGGACTCCTTCTGAATGTTATAGTCGGACAGTGTACGGCCATCT 78 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || |||||||| || || ||||| || || ||||||||||||||||||||| Sbjct 79 TCGAGCTGCTTGCCAGCAAAAATCAGTCGTTGTTGGTCTGGAGGAATTCCTTCTTTATCC 138 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || |||||||| || || || ||||| | ||||| | || ||||| | |||| || Sbjct 139 TGGATTTTAGCCTTGACGTTTTCAATTGTGTCAGAAGCCTCGACTTCTAAGGTAATAGTT 198 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || |||||||||||||| ||||| Sbjct 199 TTACCGGTAAGAGTTTTTACAAAAATTTGCAT 230 Score = 172 bits (190), Expect = 2e-37 Identities = 166/212 (78%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| ||| |||||| || ||||| |||||||| || || || |||| ||| ||||| ||| Sbjct 1160 AGACCAA-ATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCCGATAGTGTGCGCCCGTCT 1218 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||| || ||||| ||||| || | | || |||||||||||||| ||||||||||| Sbjct 1219 TCAAGCTGCTTTCCGGCAAAAATCAATCTCTGTTGATCAGGAGGAATACCTTCTTTATCT 1278 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 |||||||| || || || || ||||| | |||||| | |||||||| ||||| | || Sbjct 1279 TGAATTTTGGCCTTGACGTTTTCAATTGTATCAGAGGCCTCAACTTCCAGTGTGATGGTT 1338 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 1339 TTGCCAGTGAGAGTCTTAACAAAGATCTGCAT 1370 Score = 143 bits (158), Expect = 8e-29 Identities = 147/191 (77%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| ||| |||||| |||||||| |||||||| || || || || | ||| || |||||| Sbjct 1616 AGACCAA-ATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCGGACAGTGTACGGCCATCT 1674 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||| || || ||||| || || | ||| |||||||| ||||| || |||||||| || Sbjct 1675 TCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGAGGGATACCTTCTTTGTCT 1734 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||||||||| || || || ||||| | ||| || | ||| || || | || | ||| Sbjct 1735 TGAATTTTAGCCTTGACGTTTTCAATTGTATCGGAAGCTTCCACCTCTAAGGTGATCGTC 1794 Query 140706 TTTCCGGTTAG 140716 ||||| || || Sbjct 1795 TTTCCAGTGAG 1805 >seq26 Length=4002310 Score = 181 bits (200), Expect = 3e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||||||||| || || || ||||| || ||||| || || || || |||| |||||| Sbjct 1457968 AGAACAAGATGTAGTGTGGATTCTTTCTGGATATTGTAGTCTGACAAGGTTCTACCATCT 1458027 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 1458028 TCGAGTTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGGGGAATACCTTCCTTATCT 1458087 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || |||||||| || ||||| || || | ||| || | ||| || || | |||| || Sbjct 1458088 TGGATTTTAGCCTTGACATTCTCGATGGTATCTGAAGCTTCGACCTCCAAGGTAATGGTT 1458147 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || | |||||| |||||||| |||||| Sbjct 1458148 TTACCAGTCAATGTTTTAACAAAAATTTGCATT 1458180 Score = 168 bits (186), Expect = 2e-36 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | | ||||| |||||||||||||| || || ||||| || | Sbjct 1458173 TTTGCATTCCACCACGCAGACGCAGAACCAGATGAAGAGTAGATTCCTTCTGAATGTTGT 1458232 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | |||| || || || || ||||| ||||| || || | ||| ||||| | Sbjct 1458233 AGTCAGAAAGAGTTCTGCCGTCCTCGAGCTGTTTACCAGCGAAAATCAAACGCTGCTGGT 1458292 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || || ||||||||||| ||||||||||| || || ||||| | || |||| Sbjct 1458293 CCGGAGGGATACCCTCTTTATCCTGGATTTTAGCTTTGACGTTCTCAATAGTGTCGGATG 1458352 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || | |||||||| || | || || ||||||||||||||| Sbjct 1458353 CCTCGACCTCTAGGGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 1458408 Score = 168 bits (186), Expect = 2e-36 Identities = 162/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || ||||| | | ||||| || || || || || ||||| |||||||||| Sbjct 1471292 TTTGCATTCCTCCACGAAGACGGAGAACCAGGTGGAGTGTTGATTCTTTCTGAATATTAT 1471351 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | |||| || ||||| ||||| ||||| || || || ||||||||||| | Sbjct 1471352 AATCTGAAAGGGTTCTTCCGTCTTCCAGTTGCTTTCCTGCGAAAATGAGACGTTGCTGGT 1471411 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || ||||| || |||||||| |||||||| || ||||| | ||| |||| Sbjct 1471412 CTGGAGGAATGCCCTCTTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCTGATG 1471471 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCC 140710 |||||| || | |||| ||||||||| Sbjct 1471472 CTTCAACCTCTAAGGTAATTGTCTTTCC 1471499 Score = 136 bits (150), Expect = 1e-26 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 ||||| || || || || ||||| || || ||||| | ||| | || ||||| | || Sbjct 1472163 TGAAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGTGTCCTTCCGTCTTCTAACTGC 1472222 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||||||||| ||||| ||||| || || || || |||||||| || ||||| || Sbjct 1472223 TTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGAATCTTG 1472282 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | |||||||| || || || | |||| ||||| || ||| Sbjct 1472283 GCCTTGACATTCTCAATGGTATCAGATGCCTCGACCTCTAAAGTAATGGTCTTGCCAGTT 1472342 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || |||||||| Sbjct 1472343 AAAGTTTTAACGAAGATCTGCAT 1472365 Score = 123 bits (136), Expect = 8e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| || || || || || || || ||||| || ||||| Sbjct 1458405 CATTCCTCCACGAAGACGCAGAACCAGGTGGAGTGTTGATTCCTTCTGAATGTTGTAATC 1458464 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || | |||||||| | || || ||||||||||| ||||| ||||| || || Sbjct 1458465 AGAAAGCGTCCTTCCATCTTCTAACTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGG 1458524 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATC 140677 |||||| || ||||| || |||||||| |||||||| || ||||| | ||| Sbjct 1458525 AGGAATGCCCTCTTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATC 1458575 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| ||||| ||||| || || ||||| |||||||| || ||||| || || Sbjct 1471159 CCAGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGAATCTTGGCC 1471218 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | ||| || | ||| ||||| | ||| | ||||| || || | Sbjct 1471219 TTGACATTTTCGATGGTATCGGAAGCTTCGACTTCCAATGTGATGGTCTTGCCAGTCAAG 1471278 Query 140718 GTTTTTACAAAAATCTGCATT 140738 || || || ||||| |||||| Sbjct 1471279 GTCTTGACGAAAATTTGCATT 1471299 >seq434 Length=1254451 Score = 172 bits (190), Expect = 2e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||| || | || || ||| | |||||| || ||||||||||||||||| || || || Sbjct 843857 ACCACCTCGAAGTCGTAAAACTAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTCTGA 843916 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | ||| || |||||||| || || || |||||||| || || ||||| || || ||||| Sbjct 843917 AAGTGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAAATCAGTCGTTGTTGGTCTGGAGG 843976 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || |||||||| || ||||||||||| || || || ||||| | ||| || | ||| || Sbjct 843977 GATACCTTCTTTGTCTTGAATTTTAGCCTTGACGTTTTCAATTGTATCGGAAGCTTCCAC 844036 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || | || | |||||||| || || || || ||||| |||||||| Sbjct 844037 CTCTAAGGTGATCGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 844084 Score = 158 bits (174), Expect = 4e-33 Identities = 163/212 (77%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| ||| |||||| || ||||| || ||||| ||||| || || | ||| || |||||| Sbjct 844102 AGACCAA-ATGAAGGGTGGACTCCTTCTGAATGTTATAGTCGGACAGTGTACGGCCATCT 844160 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| || || | |||||||||||| ||||| || || ||||| || Sbjct 844161 TCGAGCTGCTTGCCAGCGAAAATCAAACGTTGCTGATCTGGAGGGATACCCTCTTTGTCT 844220 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| ||||| ||||| ||||||| ||||| | ||| || || | || | ||| Sbjct 844221 TGGATTTTTGCTTTGACATTTTCAATCGTGTCAGAAGCTTCCACCTCTAAGGTGATCGTC 844280 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || || ||||| |||||||| Sbjct 844281 TTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 844312 >seq350 Length=778331 Score = 140 bits (154), Expect = 1e-27 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 ||||||| ||||| ||||| || | || || ||||| || || ||||| ||||| |||| Sbjct 635250 CTTTTTGGATATTGTAATCGGAAAGAGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGA 635191 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | | | ||||| || || ||||| |||||||| ||||| || || ||||| ||||| | Sbjct 635190 TCAACCTCTGCTGGTCGGGTGGAATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTTT 635131 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 | || | |||||| | ||||| ||||| || | || || || || || |||||||| | Sbjct 635130 CGATGGTATCAGAAGCCTCAACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTTACGA 635071 Query 140728 AAATCTGCAT 140737 |||||||||| Sbjct 635070 AAATCTGCAT 635061 >seq85 Length=1970382 Score = 114 bits (126), Expect = 4e-20 Identities = 231/343 (67%), Gaps = 0/343 (0%) Strand=Plus/Plus Query 349547 TCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACT 349606 || ||||| | || || |||| ||| || || || || || | || | || || || Sbjct 1448090 TCGATGGTGCTCGTGAAGATGAGGGAGATCGCCGAGGCGTACCTGGGCGGTACCGTGACC 1448149 Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 | || || || || || ||||| ||||| || || ||||||| ||||| ||||| Sbjct 1448150 AACGCCGTAATAACCGTGCCAGCGTATTTCAACGACTCCCAGCGGCAGGCAACCAAAGAC 1448209 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || |||| ||| | || | || || | | || || || |||||||| || || || Sbjct 1448210 GCCGGCACCATATCCGGCCTGAACGTCTTGCGCATAATAAACGAACCCACGGCCGCTGCC 1448269 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || || || || || || || | | | || ||||| | || |||||||| || Sbjct 1448270 ATCGCCTACGGCCTCGACAAGAAAACCGCAGGCGAGAAAAACGTCCTGATTTTTGACTTG 1448329 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 || || || || || || || || | || || | || || || ||||||||||| || Sbjct 1448330 GGGGGCGGCACGTTCGACGTGTCCATTCTCACCATCGAGGATGGCATTTTTGAAGTCAAG 1448389 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| ||||| ||||| || || ||||| || |||| Sbjct 1448390 TCCACGGCTGGCGATACGCATCTCGGAGGGGAAGACTTCGATA 1448432 >seq89 Length=2320586 Score = 100 bits (110), Expect = 9e-16 Identities = 147/205 (72%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAA--CAAGATGAAGAGTAGACTCTTTT 140552 || ||||||| ||| || |||| || || ||| |||| || ||||| ||||| ||| Sbjct 1441676 ACCAATATTTG-CATGGCATCACG--ATGTTGGAATGCAAGTTGGAGAGTGGACTCATTT 1441732 Query 140553 TGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGA 140612 | || | ||| ||||| || || | | | |||||||| || ||| ||||||| | | Sbjct 1441733 TTTATGTCATAGTCAGACAAAGTACACTCGTCTTCAAGCTGCTTTTCAGCAAAAAACAAT 1441792 Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 |||||||| |||||| | |||| |||||||||||||| |||||||| | ||| Sbjct 1441793 AACTGCTGATCCAAAGGAATATCCTCTTGGTCCTGAATTTTAGCCTTTACATTTTGAATT 1441852 Query 140673 GAATCAGATGGTTCAACTTCAAGTG 140697 | ||| | | | ||| ||||||| Sbjct 1441853 GTTTCAAACGACTGAACCTCAAGTG 1441877 >seq353 Length=1135777 Score = 96.9 bits (106), Expect = 1e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| || | || ||||||||||| || || ||||| ||||| || || ||||| Sbjct 144422 CCACCACGCAAACGAAGCACAAGATGAAGTGTGGATTCTTTCTGAATGTTGTAGTCAGAC 144481 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 || || | ||||| ||||| ||||| ||||| ||||| | | ||||| ||||| || Sbjct 144482 AAGGTCCTTCCATCCTCAAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCAGGGGGG 144541 Query 140631 ATTCCT 140636 |||||| Sbjct 144542 ATTCCT 144547 >seq44 Length=2414680 Score = 96.9 bits (106), Expect = 1e-14 Identities = 236/357 (66%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || || || || | ||||| || | |||||||||||| | || ||||| || || Sbjct 1496961 CCGGAGGAGATCTCCGCCATGGTCTTGGGCAAAATGAAGGAAGTCGCGGAAGCCTACTTG 1496902 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || ||| || || | || ||| | |||||||| ||||| || || || ||||| | Sbjct 1496901 GGCAAAAATGTCACCCACGCCGTTGTAACTGTACCCGCCTACTTCAACGACGCCCAAAGA 1496842 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || ||||| || |||| ||| | || || || || | ||||| || || || Sbjct 1496841 CAGGCCACCAAAGACGCCGGCACCATATCTGGCTTGAACGTCATGAGAATCATCAACGAG 1496782 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || || || || || || || || || || || || || || Sbjct 1496781 CCCACCGCCGCGGCCATCGCTTACGGTCTCGACAA---GAAGGAAGGCGAGAAGAACGTT 1496725 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | || || || || ||||| || || || || || || || | || | ||| Sbjct 1496724 CTCGTCTTCGACTTGGGCGGTGGCACCTTCGACGTCAGCCTCCTCACGATCGACAACGGA 1496665 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 | ||||| || || || ||| || || ||||| ||||| ||||| || ||| Sbjct 1496664 GTCTTTGAGGTCGTTGCCACCAATGGAGACACCCATCTCGGTGGGGAAGACTTCGAT 1496608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515148689697335