Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq51 87.8 1e-12 >seq51 Length=2226466 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 112170 ATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAA 112229 || |||||| || || ||||| |||||||||| | |||||||| || ||||||||||| Sbjct 126752 ATCCCAAATGTTGACGCCTTTCTCTGATAACTCTTTGGCATTTGTTGAGCCTCTAATAAA 126693 Query 112230 CCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGTTAGCAGTGGAAA 112289 ||| |||| || || || || ||| ||||| | || | ||| || || || || || || Sbjct 126692 CCAGAGCAGCTCCTCAACTACTCCTCTCCAGAAGACGCGTTTTGTTGTCAGTAGCGGGAA 126633 Query 112290 AGAATCATGTAGGGAGAATC 112309 ||| ||| | |||||| Sbjct 126632 GACATC-TGTTGAAAGAATC 126614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391919590122535