Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq15 84.2 2e-11 >seq15 Length=2982310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||| |||||||||||| || ||||| ||||| ||||| | | | |||||||||||| Sbjct 1250095 GTGTAAATGTAACGAGCACTGGCAGCGTCCTTACCACCTGTACCCCTCGTACCGAATTGA 1250154 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| | |||| | || || | ||| ||| ||||||||| || || ||||| || || Sbjct 1250155 CCAATGGGCTGTAGCAGATTAATGTTATTGCTGCCCACAAAATTCTGTGCCAAATTAACG 1250214 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || || | |||| | ||||| || ||||| ||| | || || ||| || Sbjct 1250215 ATTGTGGCCGCGAGGGACATTTCACCGTGATGATAGCCCGACATTTCAGCAACGGCACCA 1250274 Query 117485 GCCAGCTGAGCCACCTTCA 117503 ||| || || ||||||| Sbjct 1250275 CTCAGTTGCGCTACCTTCA 1250293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547178755111000