Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4393 185 1e-41 seq434 185 1e-41 seq26 165 9e-36 seq350 114 1e-20 seq30 98.7 1e-15 seq353 86.0 7e-12 seq89 84.2 2e-11 >seq4393 Length=1805 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || |||||||| || |||||||| | || || ||| | | Sbjct 230 ATGCAAATTTTTGTAAAAACTCTTACCGGTAAAACTATTACCTTAGAAGTCGAGGCTTCT 171 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||||||||| ||||| || || ||||||||||||||||| Sbjct 170 GACACAATTGAAAACGTCAAGGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGACCAA 111 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || ||||||||||| ||||| ||||| |||| ||||| || | |||||||| Sbjct 110 CAACGACTGATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTGTCCGACTATAAC 51 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| |||||| | ||||||||||| || || || Sbjct 50 ATTCAGAAGGAGTCCACCCTTCATTTGGTCTTGCGTCTCCGAGGAGG 4 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || || || || || || ||||||||||| | Sbjct 686 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAAACCATCACACTTGAGGTTGAAGCTTCC 627 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| ||||||| |||||||| ||||| || || || || ||||| ||| Sbjct 626 GATACAATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAG 567 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| ||||||||||| |||||||||| ||||| || | || ||||| Sbjct 566 CAGCGTTTGATTTTCGCTGGTAAGCAGCTCGAGGATGGGCGTACTCTGTCTGATTATAAC 507 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| ||||| || | || ||||| ||||| Sbjct 506 ATTCAGAAGGAGTCTACTCTGCATCTTGTACTCCGACTTCGTGGTGG 460 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || ||||| ||||| || || || || || |||||| | | Sbjct 914 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAAACCATCACACTGGAAGTTGAGGCCTCT 855 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || ||||| |||||||| ||||| || |||||||| ||| Sbjct 854 GACACAATTGAAAATGTCAAAGCAAAAATCCAGGACAAAGAGGGTATCCCTCCAGATCAG 795 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | ||||||||||| ||||||||||| |||| ||||| | | ||||| || Sbjct 794 CAACGTTTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCGGACTACAAC 735 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || || || || ||||| || || |||||||| || || Sbjct 734 ATTCAAAAAGAGTCTACCCTACATCTCGTATTACGTCTTCGAGGAGG 688 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || ||||| || || || || || || ||| | Sbjct 458 ATGCAGATCTTCGTTAAAACTCTAACTGGCAAAACAATAACCCTAGAAGTCGAGGCCTCA 399 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | |||||||||||||| ||||| || || || |||||||| ||| Sbjct 398 GATACGATTGAAAACGTCAAGGCTAAAATTCAAGACAAAGAAGGCATACCTCCAGATCAG 339 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | ||||||||||| ||||||||||| |||| ||||| | | ||||| || Sbjct 338 CAACGTTTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCGGACTACAAC 279 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || ||||| ||| |||| ||||||||||| || || Sbjct 278 ATTCAGAAAGAGTCAACTCTCCATTTAGTTTTGCGTCTTCGAGGAGG 232 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || || || || ||||| || || || || | Sbjct 1598 ATGCAAATTTTTGTTAAAACCCTAACAGGAAAAACAATTACGCTAGAAGTCGAAGCCTCA 1539 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || ||||| || ||||| ||||| || |||||||| ||| Sbjct 1538 GACACGATTGAAAATGTCAAAGCAAAAATCCAAGACAAAGAGGGTATCCCTCCAGATCAG 1479 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| |||||||| || ||||| |||| ||||| || ||||||||||| Sbjct 1478 CAGCGTTTGATTTTCGCTGGTAAACAGCTCGAAGATGGGCGTACACTTTCAGACTATAAT 1419 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||||| || || ||||| || | || ||||| ||||| Sbjct 1418 ATTCAAAAAGAATCTACACTCCATCTTGTGCTTCGACTTCGTGGTGG 1372 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || ||||| || || || || ||||| || || ||| | Sbjct 1142 ATGCAAATTTTTGTTAAAACTCTTACTGGTAAAACAATCACTCTAGAAGTCGAGGCCTCC 1083 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || |||||||||||||| || || || || ||||| || ||| Sbjct 1082 GACACGATTGAGAATGTCAAAGCTAAAATTCAGGATAAAGAAGGTATCCCTCCCGATCAG 1023 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| |||||||| || ||||| |||| ||||| || |||||||||| Sbjct 1022 CAGCGTTTGATTTTCGCTGGTAAACAGCTCGAAGATGGGCGTACACTTTCAGACTATAAC 963 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || || || || ||||| || | || ||||| ||||| Sbjct 962 ATTCAAAAAGAGTCTACACTCCATCTTGTACTCCGACTTCGTGGTGG 916 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || ||||| || || || || || |||||| | | Sbjct 1370 ATGCAGATCTTTGTTAAGACTCTCACTGGCAAAACCATCACACTGGAAGTTGAGGCCTCT 1311 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||| |||||||| || || || || |||||||| || || Sbjct 1310 GATACAATTGAAAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1251 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| || ||||| || || || | || || ||| | ||||| || Sbjct 1250 CAGAGATTGATTTTTGCCGGAAAGCAGCTTGAAGACGGGCGCACACTATCGGACTACAAC 1191 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| ||||| |||||| | ||||||||||| || || || Sbjct 1190 ATTCAAAAGGAGTCCACCCTTCATTTGGTCTTGCGTCTCCGAGGAGG 1144 Score = 138 bits (152), Expect = 1e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || || ||||| || || | ||||| || | |||| |||| ||| | ||| Sbjct 1805 CTCACTGGAAAGACGATCACCTTAGAGGTGGAAGCTTCCGATACAATTGAAAACGTCAAG 1746 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 ||||||||||| ||||| || || || |||||||| ||||||||| | ||||| ||||| Sbjct 1745 GCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCAGCAGCGTTTGATTTTCGCTGGC 1686 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| || || |||| ||||| || | ||||| || | |||||||| || || ||| Sbjct 1685 AAGCAGCTTGAAGATGGCCGTACACTGTCCGACTACAACATTCAAAAGGAGTCTACCCTT 1626 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| | ||||||||||| || || || Sbjct 1625 CATTTGGTCTTGCGTCTCCGAGGAGG 1600 >seq434 Length=1254451 Score = 185 bits (204), Expect = 1e-41 Identities = 183/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || || ||||| || || | ||||| || | Sbjct 844084 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACGATCACCTTAGAGGTGGAAGCTTCC 844025 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | |||||||||||||| ||||| || || || ||||||||||| Sbjct 844024 GATACAATTGAAAACGTCAAGGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 843965 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || ||||||||||| ||||| ||||| |||| ||| || || ||||||| ||| Sbjct 843964 CAACGACTGATTTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACACTTTCAGACTACAAT 843905 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAA 27642 | ||||| || ||||| |||||| |||| || || ||||| ||||| ||| | ||| Sbjct 843904 ATTCAAAAAGAGTCCACACTTCATTTAGTTTTACGACTTCGAGGTGGTCAATTCTAA 843848 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || || ||||| || || | ||||| || | | Sbjct 844312 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACGATCACCTTAGAGGTGGAAGCTTCT 844253 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || ||||| || ||||| ||||| || |||||||| ||| Sbjct 844252 GACACGATTGAAAATGTCAAAGCAAAAATCCAAGACAAAGAGGGTATCCCTCCAGATCAG 844193 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | ||||| ||||| ||||| ||||| |||| ||||| || | |||||||| Sbjct 844192 CAACGTTTGATTTTCGCTGGCAAGCAGCTCGAAGATGGCCGTACACTGTCCGACTATAAC 844133 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| |||||| | ||||||||||| || || || Sbjct 844132 ATTCAGAAGGAGTCCACCCTTCATTTGGTCTTGCGTCTCCGAGGAGG 844086 >seq26 Length=4002310 Score = 165 bits (182), Expect = 9e-36 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||||||||| | || || |||||||| || || ||||| ||| || Sbjct 1458408 AATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACTATCACCCTAGAGGTCGAGGCATC 1458349 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | || |||||||| ||||| || ||||| || ||||| ||||| Sbjct 1458348 CGACACTATTGAGAACGTCAAAGCTAAAATCCAGGATAAAGAGGGTATCCCTCCGGACCA 1458289 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||| | ||||| |||||||| || |||||||| | | || || | ||||| || Sbjct 1458288 GCAGCGTTTGATTTTCGCTGGTAAACAGCTCGAGGACGGCAGAACTCTTTCTGACTACAA 1458229 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || |||||||| ||||||||||| || ||||||| || |||||| Sbjct 1458228 CATTCAGAAGGAATCTACTCTTCATCTGGTTCTGCGTCTGCGTGGTGGA 1458180 Score = 163 bits (180), Expect = 3e-35 Identities = 182/242 (75%), Gaps = 1/242 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || | || || || || ||||| | ||||| || | Sbjct 1458180 AATGCAAATTTTTGTTAAAACATTGACTGGTAAAACCATTACCTTGGAGGTCGAAGCTTC 1458121 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | ||| | ||||||||||| || || ||||| || ||||| || ||||| Sbjct 1458120 AGATACCATCGAGAATGTCAAGGCTAAAATCCAAGATAAGGAAGGTATTCCCCCTGACCA 1458061 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || |||||||| || |||||||| |||| | | ||| | ||||||| || Sbjct 1458060 GCAGCGTCTCATCTTTGCTGGAAAACAACTCGAAGATGGTAGAACCTTGTCAGACTACAA 1458001 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAG 27644 | |||| || |||||||| || ||||| || | |||||||| || || ||| || ||| Sbjct 1458000 TATCCAGAAAGAATCCACACTACATCTTGTTCTTCGTCTTCGTGGAGG-CAACTTATAAG 1457942 Query 27645 TT 27646 || Sbjct 1457941 TT 1457940 Score = 141 bits (156), Expect = 1e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| || || || | || |||||||| |||||| | ||||| ||| || Sbjct 1472368 ATCATGCAGATCTTCGTTAAAACTTTAACTGGCAAGACCATTACTTTAGAGGTCGAGGCA 1472309 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| ||||| ||| | ||||| || ||||| ||||| || || || || |||||| Sbjct 1472308 TCTGATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATCCCCCCAGAC 1472249 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || |||||||| ||||| | || || | | || || | ||||| Sbjct 1472248 CAGCAGCGTCTCATCTTTGCTGGCAAGCAGTTAGAAGACGGAAGGACACTTTCTGACTAC 1472189 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 || | || ||||||||||| ||||| Sbjct 1472188 AACATTCAGAAGGAATCCACCCTTCA 1472163 Score = 138 bits (152), Expect = 1e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || ||||| ||||| | |||||||| || |||| |||| ||| | || || ||| Sbjct 1471499 GGAAAGACAATTACCTTAGAGGTTGAAGCATCAGATACAATTGAAAACGTAAAAGCAAAA 1471440 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 ||||| ||||| ||||| ||||||||||||||||| ||||| ||||| || || |||||| Sbjct 1471439 ATTCAAGACAAAGAGGGCATTCCTCCAGACCAGCAACGTCTCATTTTCGCAGGAAAGCAA 1471380 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 || || || | | ||||| |||| |||||| | || || ||||| || || || || Sbjct 1471379 CTGGAAGACGGAAGAACCCTTTCAGATTATAATATTCAGAAAGAATCAACACTCCACCTG 1471320 Query 27613 GTCTTGCGTCTTCGCGGTGGA 27633 || | |||||||| || ||| Sbjct 1471319 GTTCTCCGTCTTCGTGGAGGA 1471299 Score = 118 bits (130), Expect = 1e-21 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || || |||||||| ||||| ||||| ||||||||||||||| Sbjct 1458575 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAAGAGGGCATTCCTCCAGACCAG 1458516 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| | || |||| | || || | || || || Sbjct 1458515 CAGCGTCTCATCTTTGCTGGCAAGCAGTTAGAAGATGGAAGGACGCTTTCTGATTACAAC 1458456 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || |||||||| || || || || || |||||||||| || ||| Sbjct 1458455 ATTCAGAAGGAATCAACACTCCACCTGGTTCTGCGTCTTCGTGGAGGA 1458408 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || |||||||| | || |||||||| || || | || || || | Sbjct 1471299 AATGCAAATTTTCGTCAAGACCTTGACTGGCAAGACCATCACATTGGAAGTCGAAGCTTC 1471240 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | |||| | ||||| || ||||| ||||| || || ||||| |||||||| Sbjct 1471239 CGATACCATCGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCCCCAGACCA 1471180 Query 27525 GCAGCGTCTAATTTTTGCTGG 27545 ||||||||| || |||||||| Sbjct 1471179 GCAGCGTCTCATCTTTGCTGG 1471159 >seq350 Length=778331 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || || || || || || || |||||||||||| | | Sbjct 635061 ATGCAGATTTTCGTAAAAACCCTCACGGGTAAAACGATCACCCTTGAGGTTGAGGCTTCT 635120 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| | || || || || |||||||| || || ||||| || |||||| Sbjct 635121 GATACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATTCCACCCGACCAG 635180 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || ||||| || || |||||||||| || || || | || || ||| Sbjct 635181 CAGAGGTTGATCTTCGCTGGCAAACAGCTCGAGGATGGCCGCACTCTTTCCGATTACAAT 635240 Query 27586 GTCCAAAA 27593 ||||||| Sbjct 635241 ATCCAAAA 635248 >seq30 Length=3281913 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || || || || |||||||| || | ||||| || | Sbjct 593909 ATGCAAATTTTCGTGAAAACCCTGACGGGTAAGACTATCACCTTGGAGGTCGAAGCCTCG 593850 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| || || |||||||||||||| || ||||| |||||| Sbjct 593849 GACACAATTGAGAACGTGAAGGCCAAGATACAGGACAAGGAGGGCATACCTCCGGACCAG 593790 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| || || || || ||||| |||| || || || | ||||| || Sbjct 593789 CAAAGGTTGATTTTCGCCGGCAAACAGCTCGAAGATGGCCGCACTCTTTCCGACTACAAC 593730 Query 27586 GTCCA-AAAGG 27595 |||| ||||| Sbjct 593729 ATCCAGAAAGG 593719 >seq353 Length=1135777 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| | Sbjct 144752 ATGCAGATCTTTGTTAAGACCCTAACAGGCAAAACTATCACCCTTGAGGTTGAAGCCTCA 144693 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGAC-AAGGAGGGAATT 27513 |||| |||| |||| | ||||| |||||||| ||| ||| ||| |||| Sbjct 144692 GATACTATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGTAATT 144644 >seq89 Length=2320586 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27448 CTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAG 27507 ||||||||| |||| ||| | ||| |||| | |||||||||||||||||| | ||| Sbjct 1441875 CTTGAGGTTCAGTCGTTTGAAACAATTCAAAATGTAAAGGCTAAAATTCAGGACCAAGAG 1441816 Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 | |||||| || |||||| | ||||||||| ||||| || || || || || Sbjct 1441815 GATATTCCTTTGGATCAGCAGTTATTGTTTTTTGCTGAAAAGCAGCTTGAAGACGAGTGT 1441756 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCT 27611 || | | |||||| | | |||| || |||||||| || || Sbjct 1441755 ACTTTGTCTGACTATGACATAAAAAATGAGTCCACTCTCCAACT 1441712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570271583248400