Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq30 107 2e-18 >seq30 Length=3281913 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 |||| || ||| || |||||||| || ||||||| |||||| | |||||| || ||||| Sbjct 991952 AGCAGTCTGTCTGCAACAAATTCAATGTACTGGCACATGAGCTTGCAGTTCATGCCAATC 991893 Query 4434 AATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | |||| || || || || | || ||||| |||||||| || ||||| ||| |||| Sbjct 991892 A-TCTCCACTGGCAGAGCATCAGTTAAAAATTCTTGTTCAATTTCAACGGCATCTTTGAT 991834 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || | | ||| || |||||| || | ||| | || | |||||| | ||| || Sbjct 991833 AATGGAGGTGACTTTTTCGGGAGATGGCTTTTGTACAATGTGTTTAAACAACAGACAAGC 991774 Query 4553 AAAATCACAATGCAAACC 4570 ||||||||| ||||| || Sbjct 991773 AAAATCACAGTGCAATCC 991756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427021260588185