Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq325 93.3 3e-15 seq7819 86.0 5e-13 >seq325 Length=122831 Score = 93.3 bits (102), Expect = 3e-15 Identities = 327/502 (65%), Gaps = 8/502 (2%) Strand=Plus/Plus Query 2715 ATAATCAGCCCACCACTGCATCATTAAACGCCGCTCATCCAAATGCTCGGAGGTATGGAT 2774 |||||| | |||||||||||||||| | | || | | |||| | |||| || Sbjct 49762 ATAATCGGACCACCACTGCATCATTTTTCTTCTTTCCGGAATAAGCTCAGCTTTATGAAT 49821 Query 2775 ATATGCCGCACGTACATTATTACGCTC-TGAGTGGCTCAGTTGCCTCTCTATCGCGTCAT 2833 ||| ||||| || |||||||| | || ||| || |||| || | || || || || Sbjct 49822 ATAAGCCGCGCGCACATTATTTCTTTCCTGA-TGACTCATCTGTCGTTCAATGGCATCCC 49880 Query 2834 CACTCCATAACCCCGACTCCCCCAACGCACCACGCGCCATAGTCCTAAACCCATGCCCAC 2893 ||||||| ||| ||||| || |||| || |||||||| | || ||||| || Sbjct 49881 GACTCCATTTCCCTGACTCAATCAGTGCACTACAAGCCATAGTACGGAATCCATGAGAAC 49940 Query 2894 ACACCTCGGTTTTAGTATCATAGCCCATCGCACGCAATGCGCTGTTTACCGTGTTTTCAC 2953 | || || |||| || | ||| ||||| | ||||||| || | || ||||||| Sbjct 49941 AAACGTCTTTTTTGGTGTTATACCCCATTGTTTGCAATGCATGATTAATAGTATTTTCAC 50000 Query 2954 TCATAACCTTAGTTGCGTCATGATCCCCCGGAAAAAGCAGCTCTT-TATCACCACTAATC 3012 |||| || | | | |||| | | || |||| || | || ||| || ||| Sbjct 50001 TCATTGGTTTTTTGGGATAGTGAT-CGCTGGTAAAAACAAATATTCTATTTCCGGTAAAT 50059 Query 3013 TGCTTTA-ACTGGTTTAA-TAAAATCATCGCCTGTCGACTAAGCGGAACGATATGTTCCT 3070 | ||| | ||| ||||| ||| ||| || ||| ||| | || |||||||| Sbjct 50060 TCCTTAATACT--TTTAATTAATTTCAACGTCTGATCACTTAATGGCACGATATGCGGTG 50117 Query 3071 CTTTCATCTTCATGCCTCGGTACGAATAACGCACACCTTTAATTTCTTCTCGCTTTGCAG 3130 |||||| || || || || ||| | ||| | |||||||| | | | || Sbjct 50118 TTTTCATTTTTGAACCACGATATGAAAATTTTACATCGGGTATTTCTTCCCTGATAGAAG 50177 Query 3131 GTATACGCCAAAGAGATTTATCGAAGTCGAATTCATCCCAACGTGCGAAACGTAATTCAC 3190 | ||| ||| | | || || | || |||||||||||||| || ||||| | ||| | Sbjct 50178 GAATAGTCCATACTGCATTCTCCAGATCAAATTCATCCCAACGCGCAAAACGCATTTCGC 50237 Query 3191 TGGAACGCACAAAAGTTAGCAA 3212 | || | |||||||| |||| Sbjct 50238 TCGATCTGACAAAAGTGTGCAA 50259 >seq7819 Length=39659 Score = 86.0 bits (94), Expect = 5e-13 Identities = 87/113 (77%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 8395 CGCTATCGCCGGAGTTCTCACGCTCGAT----GGCGATAGCCCAGACGGGGGTGAGAATA 8450 ||||| | || |||||| |||||| | || | |||||||||||||||| ||||| Sbjct 637 CGCTACCACCAGAGTTCCTACGCTCTTTTGGGGGTGGTAGCCCAGACGGGGGTAGGAATA 696 Query 8451 CCGGCTTCACAGGATACCGGCCAGCCCGGAGGCTGCCCCGCCTGAGCTACCAT 8503 |||| || | || ||||||||||| ||||||||||||||||| ||||| Sbjct 697 CCGGAACCAAACGAGACCGGCCAGCCTTTCGGCTGCCCCGCCTGAGCCACCAT 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37077780409792