Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2487 138 2e-27 seq1202 136 6e-27 seq3638 109 8e-19 seq7856 91.5 2e-13 >seq2487 Length=14168 Score = 138 bits (152), Expect = 2e-27 Identities = 184/254 (72%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 205708 GTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAA 205767 ||||| | || | ||||| | |||| | ||| |||||||| | ||||||||| |||||| Sbjct 2584 GTATAGTCTGCGTGCATATTAGTATACTGAGCTCCAAAATGTCTCCATTGAAATCCATAA 2525 Query 205768 ACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaat 205827 | |||||||||||||||||||| |||| | ||| ||| | | | || | ||| | | Sbjct 2524 ATTGGACCTAAATCACCTTCTTCCCTATTCTGAAATCCAAGACTATCTAAAAATTCTCTT 2465 Query 205828 gatccattttcatcccaaatatggattcctttattttttaGAA--TATTTGTATTAGTTG 205885 || | || |||||||||| | | || | ||| | || ||| | ||| |||| Sbjct 2464 GAGCTGTTAGCATCCCAAATTCGAACACCCT--TTTCAGACAATGTATGAGCATTCGTTG 2407 Query 205886 ATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTG 205945 ||||| || ||||| || | ||||||||| | ||| |||| || | ||||||||| | Sbjct 2406 ATCCACTGATGAACCACAAAAGTTCTTCAACTACACCTTTCCAGAATACTGATTTTGTAG 2347 Query 205946 TAAATAATGGAAAT 205959 | | |||||||||| Sbjct 2346 TTAGTAATGGAAAT 2333 Score = 104 bits (114), Expect = 4e-17 Identities = 142/195 (73%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTA-TAACTAGCAACATTAAA 205493 ||||||||||||| ||||| ||||| || ||||| || | | ||| |||| |||||| Sbjct 3229 TTTAAATTAGTTATGTGTGCTATCATGTACGTCAA-AAGCGAGTAAGATGCAATATTAAA 3171 Query 205494 TGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATT 205553 || || || | |||||| ||||| | |||||| | ||||| | ||| || | Sbjct 3170 CGGAACTCCAAGACCCATGTCAGCACTGCGTTGATAAAGATGACAAGAAAG---TTCACC 3114 Query 205554 ATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATC 205613 |||| | |||| ||||| |||| ||| ||||||||||||| |||| ||| | ||| Sbjct 3113 ATTACTAACATAGAATTGGACAAGACAGTGACAAGGTGGTAATGCCATGTTTGGTATATC 3054 Query 205614 TATAGGATTCCAGGC 205628 | ||||||||| || Sbjct 3053 AACAGGATTCCATGC 3039 >seq1202 Length=288736 Score = 136 bits (150), Expect = 6e-27 Identities = 224/325 (69%), Gaps = 2/325 (1%) Strand=Plus/Minus Query 202735 ATAATATTTTTTAATAAATAAATCAACATCAAATTTACGTCTA-CATCCTTCATAACTCA 202793 || ||| ||| ||| ||| | ||||||||| || | ||| || |||| ||| ||| Sbjct 140193 ATCATACTTTCTAACAAAAGCTTTAACATCAAACTTTC-TCTCGCAGCCTTTGTAATTCA 140135 Query 202794 TATATCTAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGAATACCACAAA 202853 | || |||||||||||||| | | |||||| ||||| || ||| || || ||||||| Sbjct 140134 TGTACCTAATTTTACCAAACACAGATCTTTCCTTCCAGCCTTGATCGTGGATGCCACAAA 140075 Query 202854 TTGACCACATACATCCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCAT 202913 | |||||||| || |||||||| ||||| ||||| | |||||| || || || |||| Sbjct 140074 TAGACCACATGCAGCCAACATAGCCATTGGGATCTCTTCCATCCATGCTGTACTTGTCAT 140015 Query 202914 TTAAATNNNNNNNNNNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttt 202973 | | || | || || ||||| || ||||| || || ||||| | Sbjct 140014 TGAGATAAATCGACCAGGCCAGAGCATCCTCTGGCGACGGAGTCCACTCCAAAATTTTCT 139955 Query 202974 tAGCCCAATACATTCTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTG 203033 | ||||| ||||| || || | || ||||| || || | | | ||| || ||||| | Sbjct 139954 TGGCCCAGTACATCCTCAAGAACCCGTGCATCTTTCCTTCTCTGACCATCTGATTTTGGG 139895 Query 203034 ATGCATTCCATAAATTGTCATGAGT 203058 || ||||| |||| ||||| || Sbjct 139894 CAGCGTTCCACAAATCATCATGGGT 139870 >seq3638 Length=67878 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | |||||| | || || ||||| || || | ||| | ||||| Sbjct 11478 ATGCAGATCTTCGTCAAGACATTGACCGGTAAAACCATCACCCTGGAGGTGGAAGCTTCC 11419 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || ||||||||||| ||||||||||| ||||| || ||| Sbjct 11418 GACACCATTGAGAACGTCAAGGCCAAAATTCAAGACAAAGAAGGTATTCCACCAGACCAA 11359 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| || || || |||||| | |||||| | |||| | || || || Sbjct 11358 CAACGTCTTATCTTCGCTGGTAAACAACTCGAGGATGGAAGAACTCTTTCGGACTACAAC 11299 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||| || | || ||||| || ||| | || |||||||| Sbjct 11298 ATCCAGAAAGAATCCACCCTTCACTTGGTCTTGCGTCTTCGTGGTGGTAT 11249 >seq7856 Length=18030 Score = 91.5 bits (100), Expect = 2e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 124535 TACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGC 124594 ||||||||| || ||| | |||||||| || || ||||| || || | ||| | || || Sbjct 6508 TACAATGCAGATCTTTGTGAAGACACTGACGGGTAAAACCATTACCTTGGAGGTAGAGGC 6567 Query 124595 AAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 ||| || ||| ||| | ||| ||||||||||| || ||||| || || || || Sbjct 6568 TTCTGACACTATTGAAAATGTCAAAGCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGA 6627 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAAC 124702 ||| || | | ||||| || ||||||||||| || ||| | || || Sbjct 6628 TCAGCAGCGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGACGTAC 6675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755369538060800