Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_002371.2 Length=41724 Score E Sequences producing significant alignments: (Bits) Value seq8198 170 5e-38 seq320 109 1e-19 >seq8198 Length=2870 Score = 170 bits (188), Expect = 5e-38 Identities = 196/264 (74%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 24190 TTTGATATGCAGTCGTGGCTCGCCGTCTTTCGGTTCAGGCCACTGGCGTGTTTTGTTTAT 24249 || ||| || || || ||||| |||||||||||||| ||||| ||||| || |||||| Sbjct 1777 TTCGATGTGAAGGCGCGGCTCACCGTCTTTCGGTTCCGGCCAGTGGCGGGTCATGTTTAC 1836 Query 24250 CTCCAGTTTTTCAATCATCGCCCTCGTAATGAATTCGTCGGAAATTCCCATGCGCCGCTG 24309 || ||| ||||| || |||| || || || |||| || || ||||||||| Sbjct 1837 CTTCAGCTTTTCTTCCAGCGCCGCGGTGATTTGCTCATCGGTGATACCGGCGCGCCGCTG 1896 Query 24310 GGCATCCCACAATAAAAACTGCATATCAGCCCATTCAAGCGGGTCTGATGGGTCGGCAGC 24369 || ||||| | | |||||||||||||||||||| |||| || |||| || Sbjct 1897 TGCGTCCCATAGCAGGAACTGCATATCAGCCCATTCGCTGAGGTCGCCAGGAGCGGCGGC 1956 Query 24370 GGCTTCCAGCGCTTCTTTCGAAAGATGTTTAAGCGGGCCGACTGGACCAACATCGCCGAA 24429 ||||||||||| ||||| ||||| ||||| ||||| || | || || |||| |||||| Sbjct 1957 AGCTTCCAGCGCCTCTTTGGAAAGGTGTTTCAGCGGTCCAATGGGGCCGACATTGCCGAA 2016 Query 24430 CGTCTTATCTGACCACTCGGCGTG 24453 ||||| |||||||| || ||||| Sbjct 2017 GGTCTTTTCTGACCATTCAGCGTG 2040 >seq320 Length=67307 Score = 109 bits (120), Expect = 1e-19 Identities = 220/323 (68%), Gaps = 4/323 (1%) Strand=Plus/Minus Query 21329 ATCGGCACCAGTTAAATCAAATACTTACG-TATTATTCGTGCCTTCCTTATTTTTACTGT 21387 |||||||||| | ||||||| | ||||| |||| || ||| |||| ||| | | Sbjct 62637 ATCGGCACCATTAAAATCAATAAGTTACGCTATTCTTATTGC--TCCTCCATTTAAGGGG 62580 Query 21388 GG-GACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGTCGAGCATGTTCAGTC 21446 || ||| |||||||||| || | | ||||||| |||||||| | || ||||| | Sbjct 62579 GGAGACCTATTTGGGACGTAACCCCAAGAAATCGAATCAATTTGGCTCGCGTGTTCCTGC 62520 Query 21447 AGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATAGACTCCCAGCCACCC 21506 | | | | | | || ||||| || | ||||| |||| | ||| || || ||| Sbjct 62519 AAACGCCTGGTCGATAAGTGCGCATAACGTTGCACCATATCGAGCGTCTCTCATCCCCCC 62460 Query 21507 ATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAACTTGCCCACGTGTGC 21566 |||| || | || ||| | ||| ||| ||||| | |||||| ||| | |||||| Sbjct 62459 ATTTGCTTGAGAGCCAAAAGAGAAACCCCAATTTGAACAAGCCAACTCGCCTAAGTGTGC 62400 Query 21567 CTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGCTCGTTTTAATGCTGCCCTCCATGCA 21626 | || ||| ||||| | ||| | || || | || || || || || ||||||| Sbjct 62399 CGCAAGTCGTGAAATCTGAAATTCTCGATCCAGGCACGGCGTAGGGCGGCTTTCCATGCC 62340 Query 21627 GTATTAGCGTCATAGCGCATCTT 21649 || |||| |||||||||||| || Sbjct 62339 GTGTTAGAGTCATAGCGCATTTT 62317 Score = 100 bits (110), Expect = 8e-17 Identities = 87/107 (81%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 21232 ATGGGACGTGTGAGCGCAGGTATGACGTGGTATGTTGTTGACTTAAAAGGTAGTTCTTAT 21291 |||| |||||||||||| | | | | |||| ||| || |||||||||| || | Sbjct 56413 ATGGAACGTGTGAGCGC-GACAGAATGCGGTAAGTTACTGTGTTAAAAGGTAATTATGCA 56355 Query 21292 AATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA 21338 |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 56354 GATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCTCCA 56308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133380696273392