Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq7856 109 4e-19 seq3638 98.7 8e-16 seq4162 95.1 1e-14 >seq7856 Length=18030 Score = 109 bits (120), Expect = 4e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 45149 TTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATC 45208 ||||| ||||||||||| ||| || | || |||| ||||||||| ||||| ||| Sbjct 6699 TTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAATTGTTTTCCAGCGAAAATC 6640 Query 45209 AACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCC 45268 || ||||| || || ||||| | || |||||||| |||||| || || | Sbjct 6639 AAACGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGCTTTGACATTTTCA 6580 Query 45269 ACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAG 45328 | |||| | |||| ||||||| |||||| || || |||||||| |||||||||||| Sbjct 6579 ATAGTGTCAGAAGCCTCTACCTCCAAGGTAATGGTTTTACCCGTCAGTGTCTTCACAAAG 6520 Query 45329 ATTTGCAT 45336 || ||||| Sbjct 6519 ATCTGCAT 6512 >seq3638 Length=67878 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||||||||| || ||| ||||||||| ||||| |||||| || | | || Sbjct 11039 AATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTTCTTCCATCC 11098 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || ||||| || ||||| || | ||||||||||| ||||| | ||||| |||||| Sbjct 11099 TCGAGCTGTTTACCCGCGAAGATAAGACGCTGTTGGTCTGGAGGGATTCCCTCTTTGTCC 11158 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | | | || | |||| || || | ||| || || Sbjct 11159 TGGATCTTAGCCTTGACGTTCTCGATGGTATCTGAAGCCTCAACTTCGAGGGTGATGGTT 11218 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||||||||| || ||||| ||||| Sbjct 11219 TTACCAGTCAGAGTCTTGACGAAGATCTGCAT 11250 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCG 45184 ||| || || || ||| ||| ||||| ||||| |||||| || ||| | |||| Sbjct 12094 TACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTT--CTTCCGTCC 12151 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || |||||||| || ||||| || | ||||| ||||| ||||| | |||||||||||| Sbjct 12152 TCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCC 12211 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || || || | | | |||| | |||||||| | || || || Sbjct 12212 TGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTTATGGTT 12271 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || || |||||||||||||| ||||| ||||| || Sbjct 12272 TTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 12306 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || ||| || ||||| ||||||||||| || | | || Sbjct 11267 AAGACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGAGTTCTTCCATCC 11326 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || |||||||| || ||||| || | || |||||||| || || | ||| || ||||| Sbjct 11327 TCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTGTCT 11386 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 |||||| ||| || | | | | |||| | | |||||||||| ||| || || Sbjct 11387 TGAATTTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCTTCCACCTCCAGGGTGATGGTT 11446 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||| ||||| || ||||| ||||| Sbjct 11447 TTACCGGTCAATGTCTTGACGAAGATCTGCAT 11478 >seq4162 Length=60589 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCG 45184 ||| || || || ||| ||| ||||| ||||| |||||| || ||| | |||| Sbjct 57443 TACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTT--CTTCCGTCC 57500 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || |||||||| || ||||| || | ||||| ||||| ||||| | |||||||||||| Sbjct 57501 TCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCC 57560 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || || || | | | |||| | |||||||| | || || || Sbjct 57561 TGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTTATGGTT 57620 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || || |||||||||||||| ||||| ||||| || Sbjct 57621 TTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 57655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395031114052276