Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3638 89.7 4e-13 seq4162 84.2 2e-11 >seq3638 Length=67878 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || |||||||| || ||||||||||| | | ||| | | ||| || Sbjct 11270 ACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGAGTTCTTCCATCCTCG 11329 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | |||||| || || ||||||| | |||||| || || | ||||| || || | Sbjct 11330 AGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGA 11389 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| |||||| | ||| ||||| | || || | ||||||| |||| Sbjct 11390 ATTTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCTTCCACCTCCAGGGTGATGGTTTTA 11449 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||||| || || || || ||||| Sbjct 11450 CCGGTCAATGTCTTGACGAAGATCTGCAT 11478 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| ||||||||||||||||| ||||||||||| | | ||| ||| ||| || Sbjct 11639 ACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCATCCTCA 11698 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || || || || ||||||||| || || || || | ||||| || || Sbjct 11699 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGG 11758 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | | | ||||| | ||| ||| | ||||||| |||| Sbjct 11759 ATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATGGTTTTT 11818 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || |||| ||||| || ||||||||||| Sbjct 11819 CCCGTCAGAGTTTTGACGAAAATTTGCAT 11847 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||||| ||||| || ||||| |||||||| || | | || | |||| Sbjct 11864 AGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCATCT 11923 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | |||||| || || |||| || | |||||| || || | |||||||| || Sbjct 11924 TCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCT 11983 Query 18234 GCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | | |||| || | | ||| |||||| | |||| ||| | ||| || | Sbjct 11984 TGGATCT-TGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATCGT 12042 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| ||||| || |||||||| ||||||||||| Sbjct 12043 TTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 12075 >seq4162 Length=60589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| ||||||||||||||||| ||||||||||| | | ||| ||| ||| || Sbjct 56988 ACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCATCCTCA 57047 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || || || || ||||||||| || || || || | ||||| || || Sbjct 57048 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGG 57107 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | | | ||||| | ||| ||| | ||||||| |||| Sbjct 57108 ATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATGGTTTTT 57167 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || |||| ||||| || ||||||||||| Sbjct 57168 CCCGTCAGAGTTTTGACGAAAATTTGCAT 57196 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||||| ||||| || ||||| |||||||| || | | || | |||| Sbjct 57213 AGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCATCT 57272 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | |||||| || || |||| || | |||||| || || | |||||||| || Sbjct 57273 TCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCT 57332 Query 18234 GCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | | |||| || | | ||| |||||| | |||| ||| | ||| || | Sbjct 57333 TGGATCT-TGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATCGT 57391 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| ||||| || |||||||| ||||||||||| Sbjct 57392 TTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 57424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379301669477220