Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq7819 720 0.0 >seq7819 Length=39659 Score = 720 bits (798), Expect = 0.0 Identities = 770/1017 (76%), Gaps = 10/1017 (1%) Strand=Plus/Minus Query 2454 GCCCGGCGGCCTGCCGGGCATATAAGTTATTTAACCTGGATAAATGGTGTATTGGCACCG 2513 ||||||| | | |||||| | | ||||||| || |||||||| ||||| || ||| Sbjct 5175 GCCCGGCA-CATACCGGGCGTGCATGTTATTTGACTTGGATAAAAGGTGTTCCCGCGCCG 5117 Query 2514 CTGGTCATGTATTGCGGCAGTGTGCCGTTCCATTTATTGATGGCTTCCAGCTCCATGACG 2573 ||||||||||| || |||| || |||||||||||||||||||| ||||||| || || Sbjct 5116 CTGGTCATGTACTGAGGCAAAGTTCCGTTCCATTTATTGATGGCCTCCAGCTGCAACACC 5057 Query 2574 CCGGGGTTCTGGCGCAGAGCTTCACCGCGTAAACGAATAGCATCAGCTTCGGCCTGGGCT 2633 | ||||| | |||| || | ||| || | ||||||| | ||||| || | || Sbjct 5056 TCCGGGTTTTCACGCATGGCCTGACCACGGATCCGAATAGATTTGGCTTCTGCTTCCGCC 4997 Query 2634 TTTGTGCGAATCGCATCAGCCTGTCCGGCAGCTTCTGCGCGCAACATATTGGCTTCCGCT 2693 | | | | ||||| ||||| || ||||||| ||||||| ||| |||||||| ||| Sbjct 4996 AGTTTCAGCTTTGCATCTGCCTGGCCATCAGCTTCCGCGCGCAGCATGTTGGCTTCAGCT 4937 Query 2694 TCGCGCTGTTTTACTTCCTGCTCGCGCTGCAGTGTTTTCTGGTTCGCCGTGACTTTGGCA 2753 || || || ||||||||||||||||||||||| || |||||||| ||||| ||||||||| Sbjct 4936 TCACGTTGCTTTACTTCCTGCTCGCGCTGCAGCGTCTTCTGGTTGGCCGTCACTTTGGCA 4877 Query 2754 TTAATGCTGTCGATAACGGTTGGCGGGTACTCCGGCTTACCCACATATGAGAGGCTCATT 2813 || ||||| |||||||| || || || || || || ||| || || || ||||| || Sbjct 4876 TTGATGCTTTCGATAACTGTCGGTGGATATTCAGGGCGACCAACGTAAGAAAGGCTGATA 4817 Query 2814 ACCTGAATACCGATAGGTGTCATCTCTGCCTGAATGTCTTTAAGAGCTTCATCCAGCAGC 2873 || || || || | || ||| || | ||| || ||||| ||||| | || |||||| Sbjct 4816 ACTTGGATGCCAACTGGACCCATATCGGACTGGATCTCTTTCAGAGCATTTTCAAGCAGC 4757 Query 2874 TCAGACTTGCCGCCGTCGATAAATTTGTCAGTGGTCATTTTGCTGGCCAGTCGGTTGAGT 2933 || | ||| |||||||| || || || || ||| |||| ||| || || || ||||| Sbjct 4756 TCCGCCTTCCCGCCGTCAATGAACTTATCTGTGCTCATGCGGCTTGCGAGACGATTGAGG 4697 Query 2934 GCGTCGGCGATCTTCTGGCGCAGGTCAGTGTCGGTAATGTCATCCACGCCTTTGCGGTAG 2993 |||||||| ||||| ||||||| || |||||||||||||| ||||| |||||||| ||| Sbjct 4696 GCGTCGGCAATCTTTTGGCGCAAATCGGTGTCGGTAATGTCGTCCACACCTTTGCGATAG 4637 Query 2994 GTCTGAAACACCGTGGTAACTTTGGATGGATCAACTTTGTAGGCCACGCCAATGTGATAG 3053 ||||| || || || |||||||||| ||| |||||||| ||||| ||||| ||||||||| Sbjct 4636 GTCTGGAAGACAGTTGTAACTTTGGTTGGGTCAACTTTATAGGCAACGCCGATGTGATAG 4577 Query 3054 CCGATGGTTGTACCGTCACTCATCTGGAAACTGAACGGTTCATCGTAGGTCTTCATTTGT 3113 ||||| || || || |||||||||||||| | || | || |||||||||||||| ||| Sbjct 4576 CCGATTGTAGTGCCATCACTCATCTGGAAGTTAAAAGCGTCGTCGTAGGTCTTCATCTGT 4517 Query 3114 TTGAAGGTGGGGAAGATATAAACTTCAGTATTCCAGCCAGTCCAGTAGCGACCAACACCG 3173 ||||||||||||||||| ||||| || || |||||||| ||||||||||| ||||| ||| Sbjct 4516 TTGAAGGTGGGGAAGATGTAAACCTCGGTGTTCCAGCCGGTCCAGTAGCGGCCAACGCCG 4457 Query 3174 ACCACCTCACCGACGCCTTTGTCGTCGCCCAGTTTATTTACCTTGATGCCAACATTACCT 3233 ||||| ||||| |||||||| ||||| || ||||| || ||||| || ||||| || ||| Sbjct 4456 ACCACTTCACCAACGCCTTTATCGTCTCCAAGTTTGTTGACCTTAATACCAACGTTGCCT 4397 Query 3234 GGTTCAACGCGATCGCAACCGACAAGGCCAATAGTCGGCAGAACAATGGCTAAAGCAAAA 3293 || ||||| || || ||||| ||||| || |||| | ||| | || | |||| | | Sbjct 4396 GGCTCAACACGGTCACAACCAACAAGACCGATAGCAGAGAGAGCGATAATTGAAGCCATA 4337 Query 3294 ATAAtttttttCATCTTTTATCC---------TTAGTGAAAGAAAGACCCTTGTAAATGG 3344 || ||||||||||| || ||| ||||| ||||||||| | || | Sbjct 4336 ATTGATTTTTTCATCTCTTTTCCTTCTTCGTTTTAGTAGTTACAAGACCCTTCCAGATTG 4277 Query 3345 CATAAATGCAGGGCGGGGTCAGAAACGCCAGTGCAAAGCCGGAAATAACTGCTATCGTAT 3404 | || ||||| ||||||||| | ||| || | ||| ||||| || |||||| || | Sbjct 4276 CGTAGATGCATAACGGGGTCAGGAGCGCGAGCGTAAAACCGGATATCACTGCTGCTGTGT 4217 Query 3405 CCTTCATGGATATAAGGAACGGAACAAGTAATCCGTAAATGCATGCGATAATTGCCA 3461 ||||||| || || || ||||| |||| | || || | || |||| ||| |||| Sbjct 4216 CCTTCATCGAAATCAGAAACGGGACAAACAGCCCATAGACGCTGGCGACAATCGCCA 4160 Score = 109 bits (120), Expect = 1e-19 Identities = 246/368 (67%), Gaps = 4/368 (1%) Strand=Plus/Plus Query 16100 CGCTGATTGCCTGGAATTTATCCAGACCTTACCGGAAAACTCTGTCGATCTGATAGTCAC 16159 ||| |||| ||| |||||||| | ||| | || || || || || | ||||| | || Sbjct 8623 CGCAGATTCTCTGCAATTTATCAAAACCATCCCCGATAATTCCGTAAACCTGATCGCGAC 8682 Query 16160 AGACCCTCCATACTTTAAAGTGAAACCCGAAGGCTGGGATAACCAGTGGAAGGGCGACGA 16219 |||||| ||||| ||| || || | | | |||||| ||||| ||| | | |||| Sbjct 8683 AGACCCGCCATATTTTGGCGTTAAGTCGAACGACTGGGACAACCAATGGGAAAGTGACGC 8742 Query 16220 TGACTACCTGAAATGGCTGGACCAGTGCCTTGCGCAGTTCTGGCGGGTACTGAAGCCTGC 16279 |||| || ||||| || ||| || ||| |||||||| || ||||| || Sbjct 8743 GGACTTTTTGGGCTGGCTTGATGAGTTTCTGGCGGAGTTCTGGAGGATACTGGCCCCAAA 8802 Query 16280 CGGAAGTCTTTACCTGTTCTGTGGTCATCGCCTGGCATCTGATATCGAAATCATGATGCG 16339 ||||| || || |||| | ||| || || || | | || ||| | | | || Sbjct 8803 TGGAAGCCTGTATATGTTTTCCGGTTCGCGGCTTGCGGCAAAAATTGAACTGCTAACCCG 8862 Query 16340 CGAACGCTTTAACGTGCTGAACCATATTATCTGGGCGAAGCCGTCCGGACGCTGGAACGG 16399 ||| || || || || ||||||||||| | |||||| || || ||| ||| ||| Sbjct 8863 CGACCGTTTCAATGTCCTGAACCATATCACCTGGGCTAAACCTAGCGGTGTATGG--CGG 8920 Query 16400 ATGCAACA--AGGAAAGCCTGCGGGCGTATTTTCCCGCCACAGAGCGTATTCTGTTTGCT 16457 |||| | | || |||||||| | | ||| || || || ||||| || | || ||| Sbjct 8921 CGGCAAAATAAAGAGAGCCTGCGTACATTTTTCCCGGCAACCGAGCGCATCATATTCGCT 8980 Query 16458 GAACATTA 16465 |||||||| Sbjct 8981 GAACATTA 8988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136103600186664