Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq4162 118 8e-22 seq3638 118 8e-22 seq7856 91.5 1e-13 >seq4162 Length=60589 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | | |||||||| | ||| ||||||||| | |||||||| || Sbjct 57197 GCCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGA 57256 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | |||||| | || || | |||||| || || || || | || ||||| || | || Sbjct 57257 GAGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGG 57316 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||| || || |||| |||| || | ||| ||||| ||||||||| Sbjct 57317 GATACCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGAC 57376 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | ||||| ||||||||||||| |||||| || ||||||||||| Sbjct 57377 TTCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 57424 >seq3638 Length=67878 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | | |||||||| | ||| ||||||||| | |||||||| || Sbjct 11848 GCCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGA 11907 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | |||||| | || || | |||||| || || || || | || ||||| || | || Sbjct 11908 GAGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGG 11967 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||| || || |||| |||| || | ||| ||||| ||||||||| Sbjct 11968 GATACCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGAC 12027 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | ||||| ||||||||||||| |||||| || ||||||||||| Sbjct 12028 TTCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 12075 >seq7856 Length=18030 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 42931 TTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGT 42990 ||||| || |||| |||||| | || ||||||||||| || || |||||||| ||||| Sbjct 6690 TTGTAGTCAGACAGAGTACGTCCATCTTCCAATTGTTTTCCAGCGAAAATCAAACGCTGC 6631 Query 42991 TGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCG 43050 ||||| | || | ||||| || || || ||||||| | ||| ||||| Sbjct 6630 TGATCTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCA 6571 Query 43051 CCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 |||||| || || | || || ||||| || || || || |||||||| || |||||| Sbjct 6570 GAAGCCTCTACCTCCAAGGTAATGGTTTTACCCGTCAGTGTCTTCACAAAGATCTGCATT 6511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381327043443048