Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq7819 104 6e-18 >seq7819 Length=39659 Score = 104 bits (114), Expect = 6e-18 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 13393 TCAGTATGAACAGTTGCGCAGACCGTTTGGTGTTACGGCTGATGTGCCATATACGGATGT 13452 |||||||||| |||||| | ||||| ||| || || ||||| || ||||||||||| Sbjct 9358 TCAGTATGAAAGCTTGCGCCGCCCGTTCTCTGTGACTGCAGATGTTCCTTATACGGATGT 9417 Query 13453 GTGGGATTTTGACCCAGTTCAGTATTACCCAGGGAAACATCCATGCGAGAAGCC-GCTGC 13511 ||||| || || || |||||||||||||||||||| || ||||||||||| || | Sbjct 9418 TTGGGAGTTCCCACCGGTGCAGTATTACCCAGGGAAACACCCGTGCGAGAAGCCAGCCG- 9476 Query 13512 CGTTGATGCGCCACAT 13527 || ||||| ||||| Sbjct 9477 CGATGATGGAACACAT 9492 Score = 89.7 bits (98), Expect = 1e-13 Identities = 254/387 (66%), Gaps = 8/387 (2%) Strand=Plus/Plus Query 12704 AAAACATTGCCAGATAATTCTGTTGACCTTATTGCCACTGACCCACCTTACTTTCGAGTA 12763 ||||| | || |||||||| || |||| || || || ||||| || || ||| | || Sbjct 8645 AAAACCATCCCCGATAATTCCGTAAACCTGATCGCGACAGACCCGCCATATTTTGGCGTT 8704 Query 12764 AAGCAAGATGCCKGGGATAACCAGTGGGATGATGAGACAGAGTTCCTGGCGTGGCTTGAC 12823 ||| | | | |||| ||||| ||||| ||| | || || ||| |||||||| Sbjct 8705 AAGTCGAACGACTGGGACAACCAATGGGAAAGTGACGCGGACTTTTTGGGCTGGCTTGAT 8764 Query 12824 GATATTCTCTTTGACTTATGGCGAATATTGAAGCCATCGGGCAGTTTGTATCTATTTT-- 12881 || |||| || || ||| | ||| || ||| || || ||||| | |||| Sbjct 8765 GAGTTTCTGGCGGAGTTCTGGAGGATACTGGCCCCAAATGGAAGCCTGTATATGTTTTCC 8824 Query 12882 -GTTCTGACCGGTTAGCGGCCAGAACTGAGGTGCTAATTGCTGAACGCTTTAATGTCTTG 12940 |||| ||| | ||||| | || ||| |||||| || || || |||||| || Sbjct 8825 GGTTCG---CGGCTTGCGGCAAAAATTGAACTGCTAACCCGCGACCGTTTCAATGTCCTG 8881 Query 12941 AACCATATCGTCTGGAGAAAAGAAAACGGAGTGCATAAGCGCCATCGTAAAGAAGGCCTG 13000 ||||||||| |||| ||| | ||| || ||| || |||||| ||||| Sbjct 8882 AACCATATCACCTGGGCTAAACCTAGCGGTGTATGGCGGCGGCAAAATAAAGAGAGCCTG 8941 Query 13001 CG-CCGTTTCTGCCCTCAGACCGAGCGCATTATCTTTGCAGAGCACTATGGTGCTGAGGG 13059 || | ||| | || || ||||||||||| || || || || || || || || || Sbjct 8942 CGTACATTTTTCCCGGCA-ACCGAGCGCATCATATTCGCTGAACATTACGGCGCGTCTGG 9000 Query 13060 GTTTGCCAAAGGCCGGGCTGGATATGC 13086 | ||| ||||| | | | || ||||| Sbjct 9001 CTATGCGAAAGGTCAGTCGGGGTATGC 9027 Lambda K H 0.635 0.408 0.914 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138096983427520