Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq356 269 7e-68 seq301 114 3e-21 >seq356 Length=90444 Score = 269 bits (298), Expect = 7e-68 Identities = 404/574 (70%), Gaps = 0/574 (0%) Strand=Plus/Plus Query 25560 GCAGCACGCTGGTATCCACATATCACTGCAGCCATGAATGAATTTGGCATTACCAAGCCA 25619 || || ||||||| || | |||| || || ||||| || || ||||| |||||||| Sbjct 41906 GCTGCGCGCTGGTTTCAGCCAATCAGTGATGCGATGAAAGAGTTCGGCATCACCAAGCCG 41965 Query 25620 GATGACCAGGCGATGTTTATCGCACAGGTCGGGCATGAGTCAGGAGGATTTACCCGGCTA 25679 | |||||||| ||||| || || |||| ||||||||||| ||| || ||||||||| Sbjct 41966 GTAGACCAGGCCATGTTCATTGCGCAGGCTGGGCATGAGTCGACAGGGTTCACCCGGCTA 42025 Query 25680 CAGGAAAACTTCAACTACAGCGTTAACGGGCTGTCCGGGTTTATCCGTGCCGGGCGAATC 25739 ||||||||||||||||||||||| ||| | | || || ||||| || || ||| Sbjct 42026 CAGGAAAACTTCAACTACAGCGTAGTGGGGTTAACAAATTTCATTCGTGCGGGACGCATC 42085 Query 25740 ACTCCAGACCAGGCCAACGCACTCGGCAGGAAAACATATGAGAAGTCTCTTCCTCTGGAG 25799 || | ||||||||| ||| | ||| | | | | ||| | | || | ||| Sbjct 42086 ACACAAGACCAGGCTAACCAGTTAGGCCGCCGACCTGAAGAGCGAGCATTACCGATTGAG 42145 Query 25800 CGTCAGCGTGCAATTGCCAATCTGGTGTACAGCAAGCGCATGGGAAATAACGGACCGGGC 25859 ||||||||||| ||||| || |||| |||||||| ||| || || || | || || Sbjct 42146 CGTCAGCGTGCCATTGCTAACTTGGTCTACAGCAAACGCTACGGTAACAATGCGCCTGGT 42205 Query 25860 GACGGATGGAATTATCGCGGTCGTGGACTTATTCAGATCACCGGCCTGAATAACTACCGC 25919 || |||||||| || || | ||||| || || ||||| |||| |||||||||| Sbjct 42206 GATGGATGGAAATACCGTGCGCGTGGGCTCATCGGCATCACGTTCCTGGATAACTACCGT 42265 Query 25920 GACTGTGGCAACGGCCTGAAGGTGGATCTGGTTCAGAATCCTGAACTGCTGGCGCAGGAC 25979 ||||| |||| | ||||||||| |||||||||||| | ||||| || | || || | Sbjct 42266 GACTGCGGCATTGCCCTGAAGGTTGATCTGGTTCAGCAGCCTGAGCTATTAGCCGAGCCC 42325 Query 25980 GAATACGCGGCCCGCAGCGCGGCGTGGTTCTTCGCAACCAAAGGCTGCATGAAGTACACC 26039 || || || | |||||||| |||||||||| || || || || |||| || | Sbjct 42326 ATTTATGCAGCAAGGAGCGCGGCATGGTTCTTCGTTACAAAGGGATGTCTGAACTATTCA 42385 Query 26040 GGCGACCTGGTGCGCGTCACGCAGATCATAAATGGCGGGCAGAACGGTATCGACGACCGG 26099 | ||||| ||| || ||| | || || |||||||| |||||| | || || || Sbjct 42386 GATAACCTGCTGCAGGTAACGAAAATTATCAATGGCGGAACGAACGGACTTGAAGATCGT 42445 Query 26100 CGCGCGCGGTACATAACTGCCAGTAAGGTGCTGG 26133 ||||| || | | | |||| | |||||||| Sbjct 42446 CGCGCTCGCTTCGGTAAGGCCAAAACGGTGCTGG 42479 Score = 201 bits (222), Expect = 3e-47 Identities = 177/221 (80%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 38255 CATGACCACTATTACCAAAGAACAGGCACAAGAAATAATTGATGCTGCCGACGAGGTCAT 38314 ||||| ||||||||||||||| ||||| | |||| ||||| || ||||| ||||| || Sbjct 29662 CATGATCACTATTACCAAAGAGCAGGCGAAGCAAATCATTGAGGCAGCCGATGAGGTTAT 29603 Query 38315 CACTGCACTTGCTGGTACTAACGAGGATGTACACCCGGACAACAGCCAAGAGATGATCCG 38374 || || | || || |||||||| || || || ||||| |||||| | ||| | | Sbjct 29602 AACCGCGTTGGCCGGAACTAACGAAGACGTTCATCCGGATAACAGCACCAAAATGGTTCA 29543 Query 38375 GTTGTACGATGACCTAAATGACCACTACGCCCCGCCAGAAGTTGTGCGCGAGCTGGCGCG 38434 ||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||| Sbjct 29542 GTTGTACGATGACCTGAACGACCACTACGCACCGCCAGAAGTTGTGCGAGAGCTGGCGCG 29483 Query 38435 TATCGCGTTGGTATCGCTTACCGCTGAACCTGTGGCGTACA 38475 ||||||| ||| |||||| || || ||||| ||||||| Sbjct 29482 TATCGCGCTGGCATCGCTCGAAGCGGAGCCTGTTGCGTACA 29442 >seq301 Length=62477 Score = 114 bits (126), Expect = 3e-21 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 25809 GCAATTGCCAATCTGGTGTACAGCAAGCGCATGGGAAATAACGGACCGGGCGACGGATGG 25868 || ||||| ||| | |||||| | | |||||||| ||| || | |||||| ||| Sbjct 10980 GCGATTGCTAATATCGTGTACGCCCACCGCATGGGGAATGTCGCAGAAAACGACGGCTGG 10921 Query 25869 AATTATCGCGGTCGTGGACTTATTCAGATCACCGGCCTGAATAACTACCGCGACTGTGGC 25928 ||||||||||| |||||||| || ||||| ||||||| | || ||||| || ||||| Sbjct 10920 AATTATCGCGGCCGTGGACTGATACAGATTACCGGCCACGACAATTACCGGGATTGTGGT 10861 Query 25929 AACGGCCTGAAGGTGGATCTGGTTCAGAATCCTGAACTGCTGGCGCAGGACGAATACGCG 25988 || ||| || ||| || | | | ||| | || ||| |||||| | ||| || Sbjct 10860 GCTGGGCTGGGGGCTGATTTGTTACTGGTTCCGCAGCTTTTGGAGCAGGATGCATATGCA 10801 Query 25989 GCCCGCAGCGCGGCGTGGTTCTTCGCAACCAAAGGCTGCATGAAGTACACCGGCGA 26044 ||||| ||||||||||||| | | |||||||| ||||| || |||| || Sbjct 10800 GCCCGTTCTGCGGCGTGGTTCTATACCGCAAAAGGCTGTCTGAAGCACTCCGGAGA 10745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126811810569576