Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq304 221 1e-52 >seq304 Length=131104 Score = 221 bits (244), Expect = 1e-52 Identities = 534/800 (67%), Gaps = 24/800 (3%) Strand=Plus/Plus Query 100304 TTCAATTCGTTTTCAATTTGGCGATAATCGACAACGCCGTCTTCCCAAGTGCCGGTCACG 100363 |||| |||||| | || | ||| || || || | ||||| |||||| ||||| | | Sbjct 47117 TTCATGTCGTTTACGATGTTGCGGTAGTCAACGATGCCGTTTTCCCACGTGCCTTTGATT 47176 Query 100364 GGCCCGGCAGCTGTGCCTGTGAAATAGTTGTCACCGTCATAGCCCGCCACGCCTGTCCAA 100423 | |||| || ||||| ||||| ||||| ||| || || ||||| ||||| Sbjct 47177 GCGCCGGTTGCAGTGCCGGTGAACGGATTGTCGCCGGTGTAACCGTGAACGCCCGTCCAG 47236 Query 100424 CCGCGGCCGTACATGGCAACGCCCACAATAATTTTGCGCGGGTCCACGCCCTGGTTCGTG 100483 |||||||| ||||| || | ||||| | || |||| || | |||||||| || Sbjct 47237 CCGCGGCCATACATTGCCGCACCCACTACGATCTTGCCTGGCTGTACGCCCTG---CGCC 47293 Query 100484 AGCAA---TTTCACGGCGTGATCCGTGTTGTACAGCTCGTTCGGG-TTCCAACTCGGCGC 100539 |||| ||| || |||| || ||| ||||| ||| || || || | ||| || Sbjct 47294 AGCATCGCTTTAACCGCGTTGTCGGTGGTGTAC-GCTGTGTCAGGCTTATAGGACGGTGC 47352 Query 100540 GTAGAGAGTGGTTTGGTAGCCCAAATCGGTGTTTGACCAGGCGCCTTTAAAATCGTAGCT 100599 || || | || |||| ||||| |||||||| ||| ||||| | || |||||||| Sbjct 47353 ATACAGCGCCGTCTGGTGGCCCAGGTCGGTGTTGCTCCACGCGCCGTAGAAGTCGTAGCT 47412 Query 100600 CATAAGAAATATTTTATCGAGAAGCTTTTGCGCAACGTCGTACTGTACCACAGCAATTTT 100659 ||| || || || | || | || || ||| | | ||| | ||| | ||||||| Sbjct 47413 CATCAGGAAGATGTAGTCCATGTACTGCTGAGCAGCTTTGTAGTCTACGTCTTCAATTTT 47472 Query 100660 GTCATAGCCGGAACTGATTGCGCTTGTCAACTCGTACGTTTTGCCCGTTTGCAGTTGT-A 100718 || ||||||| | ||| || |||| ||||||| | | ||| || ||| | | Sbjct 47473 ATCCCAGCCGGAGCCGATAGCAGAGGTCAGCTCGTAC-TGACGACCGGTTTCAGCGGAGA 47531 Query 100719 GCTGGTCCAGCATCGCGCGCAATTCCTTCAGTAAAATGTTGTACGTGTCGGCGTCGCGCT 100778 | || ||||||| ||||| || | || | | | |||| || || || || Sbjct 47532 GGCCGTTCAGCATCTGGCGCAGATCGTGCATCAGCAGGGTGTAGGTCTCTTTATCAACCT 47591 Query 100779 CCCCGTTGCCAAGAGTCGGGTTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCAATGTCCA 100838 |||||| || |||| ||| | || |||||| || || |||||||| || |||| Sbjct 47592 GTGGGTTGCCGAGGGTCGCGTTCTCACCGCCGCCGCCAGGGAATTCCCAGTCGATATCCA 47651 Query 100839 CGCCGTCAAAAAACTTCCACACCTGCAAAAATTCCTTGACCGAGTCCACAAA-----CAC 100893 ||||||| | || ||||| ||| | ||||| || || ||| | || || ||| Sbjct 47652 CGCCGTCGTAGAATTTCCAGGTCTGGAGGAATTCTTTAACGGAGCCAACGAAACGGTCAC 47711 Query 100894 GCGCCGTTTTTCCGCATCGTGCA--TGAAATAGAACGGGTCGGACAACGTCCAGCCGCCG 100951 || | ||| ||||||| || || ||||||||| || | |||||||| ||| Sbjct 47712 GCAGCACTTTG-----TCGTGCAGCTGGAA--GAACGGGTCAGAAAGTGTCCAGCCACCG 47764 Query 100952 ATGGACGGCAGAATTTTGAGGTGCGGATTGGCCAGCTTGGCCGCCATTAGCTGACCGAAA 101011 ||||| ||||||||||| ||| ||||| || || |||||| | ||||||| | Sbjct 47765 ATGGATGGCAGAATTTTCAGGCCCGGATGCGCTTTTTTCAGCGCCATCATCTGACCGTAG 47824 Query 101012 TTGCCCTTGTACGGCTCGTTCCATGCGGACACGCCCTTTTGCGGTTTTTGTATTGCGGCC 101071 | || |||||||| |||| ||| || |||||| || || || | || | || ||| Sbjct 47825 GTCCCTTTGTACGGGTCGTCCCAGTTGGTCACGCCTTTCTGTGGCATCTGCAGCGCAGCC 47884 Query 101072 CAGGGATCGTGAATGGCGAC 101091 || |||||||| || || || Sbjct 47885 CACGGATCGTGGATCGCCAC 47904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414526538339464