Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_004913.3 Length=59866 Score E Sequences producing significant alignments: (Bits) Value seq7819 291 3e-74 seq300 212 2e-50 seq8198 93.3 2e-14 seq356 89.7 2e-13 >seq7819 Length=39659 Score = 291 bits (322), Expect = 3e-74 Identities = 349/472 (74%), Gaps = 9/472 (2%) Strand=Plus/Plus Query 55960 GGTGCTTCTGCGCCTGAAATCCTCGACCAGTTTCTGGATGAAAAGGAAGGTAACCACACC 56019 || ||||| || || |||| |||||||||||| ||||||| || || || || Sbjct 10087 GGCGCTTCGGCCCCAAAAATTCTCGACCAGTTTTTGGATGAGAAAGAGGGGAATAGTCTT 10146 Query 56020 ACAGCATACCGTGATGGTGCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGAT 56079 || || ||| ||||| || |||||||| || |||||||| ||||| ||| ||| Sbjct 10147 ACTGCGTACAAGGATGGAAGTGGCATCTGGACGATTTGCCGTGGTGCCACAATGGTTGAT 10206 Query 56080 GGTAAGCCTGTTATTCCTGGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCC 56139 |||||| | ||| | | ||||||||| | || ||| |||||||||| |||||| ||| Sbjct 10207 GGTAAGTCAGTTGTGCAGGGCATGAAGTTAACGCAGGCAAAATGCGACAAGGTTAATGCC 10266 Query 56140 ATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCGCTGACCGAA 56199 || || || |||||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct 10267 ATCGAACGGGATAAGGCTCTGGCGTGGGTTGACCGCAATATCAAAGTTCCTCTGACCGAA 10326 Query 56200 CCCCAGAAAGCGGGGATCGCGTCATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTTC 56259 || || ||||| || ||||| || ||||| ||||||||||| || || || || || ||| Sbjct 10327 CCTCAAAAAGCCGGAATCGCATCTTTCTGCCCGTACAACATAGGCCCAGGCAACTGCTTC 10386 Query 56260 CCGTCGACGTTTTACAGACGAATTAATGCAGGTGATCGAAAAGGTGCCTGCGAAGCTATT 56319 || |||||||| || | || ||||||| || || || ||||| |||||||| || || Sbjct 10387 CCATCGACGTTCTATAAGCGTCTTAATGCTGGCGACCGCAAAGGGGCCTGCGAGGCGATA 10446 Query 56320 CGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCG-----TATTCGTTCA-AACAA---C 56370 || |||||||| || || |||||| | |||||||| | | ||| || || Sbjct 10447 CGATGGTGGATAAAAGATGGTGGCCGTGACTGCCGACTAACAAAGGGTCAGAAGAATGGG 10506 Query 56371 TGTTACGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTGGG 56422 || ||||| ||||| || ||||||||||| || ||||| || ||||||| Sbjct 10507 TGCTACGGGCAGGTTGAACGCCGTGACCAGGAAAGTGCGCTTGCCTGCTGGG 10558 >seq300 Length=47897 Score = 212 bits (234), Expect = 2e-50 Identities = 450/661 (68%), Gaps = 32/661 (5%) Strand=Plus/Minus Query 55785 CAGTGGGCGGCAATAGGCGTGCTGGGGAGTCTGCTGTTTGGGCTGCTGACATATCTGACG 55844 |||||||| || ||||| || | || ||| | || || || |||| || | ||| || Sbjct 11405 CAGTGGGCAGCTATAGGTGTAATCGGTAGTTTACTTTTCGGCTTGCTTACCTTTCTTACC 11346 Query 55845 AACCTGTATTTCAAGATTAAAGAAGACCGGCGTAAGGCGGCACGGGGAGAGTAAGCTGAT 55904 || || || ||| | || |||| || || || || || || ||||| || ||| || Sbjct 11345 AATCTCTACTTCCAAATCAAAGCGGATCGCCGCAAAGCTGCGCGGGGTGAATAA--TGTC 11288 Query 55905 GAGCAGGAAACTCCGCTATGGTTTATCGGCTGCCGTTCTGGCGCTGATTGCCGCAGGTGC 55964 || || || || | || | || | || || ||| |||| || || ||||||| Sbjct 11287 GAACA---AA----GCCAAACTT-AGCG-CAGCAGTGCTGACGCTAATCGCGTCAGGTGC 11237 Query 55965 TTCTGCGCCTGAAATCCTCGACCAGTTTCTGGATGAAAAGGAAGGTAACCACACCACAGC 56024 | ||| || || |||||||||| | || || ||||| || | | | Sbjct 11236 ATGTGCTCCACTCATTTTCGACCAGTTCATCAGCGAGAAAGAAGGCAATA----CGCTGG 11181 Query 56025 ATACCGT-GATGGTGCGGGTA---TCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATG 56080 |||| | || | ||||| ||||| | | || | ||| | ||| | |||| Sbjct 11180 TGGCCGTTGTTGATCCGGGTGGGGTCTGGTCTTTATGTCATGGTGTGACCGTCATCGATG 11121 Query 56081 GTAAGCCTGTTATTCCTGGCATGAAG--CTGTCGAAGGAAAAATGCGACCGGGTTAACGC 56138 | | || |||| || ||||||| | | || ||||| | ||| ||||||||| Sbjct 11120 GCAGGCGTGTTGTTAAAGGCATGACGGCCAGTG--AGGAACAGTGCCGAGAGGTTAACGC 11063 Query 56139 CATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCGCTGACCGA 56198 ||||| || |||||||| | || ||||| || || ||||||||||| ||||| || Sbjct 11062 TATTGAACGCGATAAGGCATTAGCCTGGGTTGACCGCAATATCAAAGTGCCTCTGACAGA 11003 Query 56199 ACCCCAGAAAGCGGGGATCGCGTCATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTT 56258 || ||||| | || || || || ||||| ||||| ||||| || |||||||| || || Sbjct 11002 GCCACAGAAGGTAGGTATTGCATCCTTCTGCCCGTATAACATCGGCCCCGGTAAATGCTT 10943 Query 56259 CCCGTCGACGTTTTACAGACGAATTAATGCAGGTGATCGAAAAGGTGCCTGCGAAGCTAT 56318 || ||||| || || | || || ||||||||||| || | ||||| |||||||| || Sbjct 10942 ACCCTCGACATTCTATCGGCGCATCAATGCAGGTGACCGCATCGGTGCATGCGAAGCAAT 10883 Query 56319 TCGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTAT-----TCGTTCA-AACAA--- 56369 ||||||||||||||||||||||| |||| |||||| | | || || || Sbjct 10882 CCGCTGGTGGATTAAGGACGGTGGACGAGATTGCCGTCTGACCAAAGGCCAGAAGAATGG 10823 Query 56370 CTGTTACGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTGGGGAATCGA 56429 ||| || |||||||| || ||||| ||||| ||||| ||||| |||||||| || || Sbjct 10822 CTGCTATGGTCAGGTGGAACGACGTGATCAGGAAAGCGCTCTGGCATGCTGGGGGATAGA 10763 Query 56430 C 56430 | Sbjct 10762 C 10762 >seq8198 Length=2870 Score = 93.3 bits (102), Expect = 2e-14 Identities = 110/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 36932 GTTGCGCTGTAATTCTTCAATTTCTGATGCTGAATCAATGAGGTCTGCCATCTTTCATTA 36991 ||| ||||| | |||||||| |||| ||| | ||| |||| ||| ||||| | || | Sbjct 2714 GTTACGCTGAAGCTCTTCAATCTCTGCTGCGGTATCGATGATGTCGGCCATGGT-CAGTG 2772 Query 36992 ATCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTG 37051 |||| ||| ||| ||||||| || |||| |||||| || | ||||||||||| || Sbjct 2773 CTCCCGGAACTGTCGGTTAATTCGGTTGAAGGTGAACGCCAGCAATAAAAAAGGCCGCTT 2832 Query 37052 TAGCTCCCTGATGATTTTGCTTTTCATG 37079 |||| |||| |||||| ||||||| Sbjct 2833 TAGCGACCTGGTGATTTGCGATTTCATG 2860 >seq356 Length=90444 Score = 89.7 bits (98), Expect = 2e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 42961 CAGAAATCGCCGGGCTCAACAGCTTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGA 43020 |||||||| || || |||||| | || ||||| || | || || | ||| || |||||| Sbjct 33534 CAGAAATCACCAGGATCAACATCCTGTTCAGGATCTATGAGTATGAGCATTCCCTCAGGA 33593 Query 43021 AAACTAGGTTTGGAACCTGTTGGTGCGGTCATTGAGTTACCTTCAACCTCAAGCCAGAAT 43080 || || ||||| |||| || || ||||| || | |||| ||||||||||| || Sbjct 33594 AAGCTCGGTTTTACTCCTGGAGGCGCAGTCATCGAATGACCTGATACCTCAAGCCAAAAG 33653 Query 43081 GCAGAGTCACTGGCTTT 43097 || |||||||| ||||| Sbjct 33654 GCGGAGTCACTAGCTTT 33670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191428784163616