Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq4162 96.9 2e-15 seq3638 96.9 2e-15 >seq4162 Length=60589 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||| |||||||| | || ||||| ||||| || ||||||||||| | | || Sbjct 57210 CGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCA 57269 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || || | ||| || ||| || || | |||||| ||||| | || || ||||| || Sbjct 57270 TCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTG 57329 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| ||| || ||| ||| ||||| | | || |||| |||||| Sbjct 57330 TCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATC 57389 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 |||||||| || | |||||||||||||||||||||| Sbjct 57390 GTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 57425 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/223 (70%), Gaps = 14/223 (6%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | ||| || |||||||| || ||||| || || | ||||| Sbjct 56982 CGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAA----GAGTTCT 57037 Query 33215 TC-ATCC---AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270 | |||| | ||||| ||| || || | || |||||||| | || || ||||| Sbjct 57038 ACCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTC 57097 Query 33271 TTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327 ||| || ||| |||| | || | | || |||||| | || || ||||| Sbjct 57098 TTTGTCCTGGATCTTGGCCT---TGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAG 57154 Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || ||||||||||| |||||||| ||||||||||||||| Sbjct 57155 GGTGATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCATG 57197 >seq3638 Length=67878 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||| |||||||| | || ||||| ||||| || ||||||||||| | | || Sbjct 11861 CGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCA 11920 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || || | ||| || ||| || || | |||||| ||||| | || || ||||| || Sbjct 11921 TCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTG 11980 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| ||| || ||| ||| ||||| | | || |||| |||||| Sbjct 11981 TCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATC 12040 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 |||||||| || | |||||||||||||||||||||| Sbjct 12041 GTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 12076 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/223 (70%), Gaps = 14/223 (6%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | ||| || |||||||| || ||||| || || | ||||| Sbjct 11633 CGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAA----GAGTTCT 11688 Query 33215 TC-ATCC---AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270 | |||| | ||||| ||| || || | || |||||||| | || || ||||| Sbjct 11689 ACCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTC 11748 Query 33271 TTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327 ||| || ||| |||| | || | | || |||||| | || || ||||| Sbjct 11749 TTTGTCCTGGATCTTGGCCT---TGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAG 11805 Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || ||||||||||| |||||||| ||||||||||||||| Sbjct 11806 GGTGATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCATG 11848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318742028006088