Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq7856 98.7 7e-16 seq4162 82.4 5e-11 seq3638 82.4 5e-11 >seq7856 Length=18030 Score = 98.7 bits (108), Expect = 7e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| |||||||||||||| || || ||||| || ||||| || |||| | ||||| | Sbjct 6668 CATCTTCCAATTGTTTTCCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATTCCTTCCT 6609 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 | ||| |||||| |||||| | ||| ||| || | | ||| || || | |||| Sbjct 6608 TGTCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGCCTCTACCTCCAAGGTAA 6549 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | |||||||| || | ||||||||||| || ||||| Sbjct 6548 TGGTTTTACCCGTCAGTGTCTTCACAAAGATCTGCAT 6512 >seq4162 Length=60589 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || || ||| ||||| || || ||||| | ||| |||| || Sbjct 57216 ACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCATCTTCT 57275 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | |||||| || || || || | ||||| ||||| | || | |||||| || ||| Sbjct 57276 AGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGG 57335 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | ||| ||| |||| | ||| || || | || || ||||| Sbjct 57336 ATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATCGTTTTT 57395 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||||||||| || || || ||||||||| Sbjct 57396 CCGGTTAAAGTTTTTACGAAAATTTGCATG 57425 >seq3638 Length=67878 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || || ||| ||||| || || ||||| | ||| |||| || Sbjct 11867 ACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCATCTTCT 11926 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | |||||| || || || || | ||||| ||||| | || | |||||| || ||| Sbjct 11927 AGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGG 11986 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | ||| ||| |||| | ||| || || | || || ||||| Sbjct 11987 ATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATCGTTTTT 12046 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||||||||| || || || ||||||||| Sbjct 12047 CCGGTTAAAGTTTTTACGAAAATTTGCATG 12076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354738010811088