Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4162 154 3e-32 seq3638 154 3e-32 seq7856 150 4e-31 seq1202 123 6e-23 >seq4162 Length=60589 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||||| ||| | || || |||||||| || |||||||| || | ||||| ||||| Sbjct 57441 AGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTTCTTCCGTCC 57500 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || |||||||| ||||| || || || | ||| || || ||||| ||||| || || ||| Sbjct 57501 TCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCC 57560 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| ||||| |||||||| | ||| || | ||| ||||||| || || || Sbjct 57561 TGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTTATGGTT 57620 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || || || || || ||||||||||| Sbjct 57621 TTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 57655 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||| |||||||| || || || ||||| || ||||||||||| || || || || || || Sbjct 56999 TGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCATCCTCAAGCTGCTTACC 57058 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||| || || || | ||| || || || || ||||||||||| ||||| ||||| || || Sbjct 57059 AGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGGATCTTGGCCTT 57118 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || ||| || || || || || || || || || || || Sbjct 57119 GACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCCGTCAGAGT 57178 Query 104542 TTTTACAAATATCTGCAT 104559 ||| || || || ||||| Sbjct 57179 TTTGACGAAAATTTGCAT 57196 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || || ||||| || || | || |||||||||||||| ||| Sbjct 57228 GTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCATCTTCTAGTTGTTTACCA 57287 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||| || || || || ||||| || || || ||||| ||||| Sbjct 57288 GCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCTTTC 57347 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | || || || || || || | || || || || || || | ||| Sbjct 57348 ACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATCGTTTTTCCGGTTAAAGTT 57407 Query 104543 TTTACAAATATCTGCAT 104559 ||||| || || ||||| Sbjct 57408 TTTACGAAAATTTGCAT 57424 >seq3638 Length=67878 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||||| ||| | || || |||||||| || |||||||| || | ||||| ||||| Sbjct 12092 AGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTTCTTCCGTCC 12151 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || |||||||| ||||| || || || | ||| || || ||||| ||||| || || ||| Sbjct 12152 TCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCC 12211 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| ||||| |||||||| | ||| || | ||| ||||||| || || || Sbjct 12212 TGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTTATGGTT 12271 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || || || || || ||||||||||| Sbjct 12272 TTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 12306 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || || ||||| || |||||||| || || || |||||||| ||| Sbjct 11282 GTGGATTCTTTCTGGATGTTGTAGTCCGAAAGAGTTCTTCCATCCTCGAGTTGTTTACCA 11341 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||| || || || || |||||||| || ||||| || || || Sbjct 11342 GCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTGGCCTTG 11401 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| || ||| ||||| || || || || ||||| || | ||| Sbjct 11402 ACGTTCTCAATGGTGTCGGAAGCTTCCACCTCCAGGGTGATGGTTTTACCGGTCAATGTC 11461 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 11462 TTGACGAAGATCTGCAT 11478 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||| |||||||| || || || ||||| || ||||||||||| || || || || || || Sbjct 11650 TGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCATCCTCAAGCTGCTTACC 11709 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||| || || || | ||| || || || || ||||||||||| ||||| ||||| || || Sbjct 11710 AGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGGATCTTGGCCTT 11769 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || ||| || || || || || || || || || || || Sbjct 11770 GACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCCGTCAGAGT 11829 Query 104542 TTTTACAAATATCTGCAT 104559 ||| || || || ||||| Sbjct 11830 TTTGACGAAAATTTGCAT 11847 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || || ||||| || || | || |||||||||||||| ||| Sbjct 11879 GTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCCATCTTCTAGTTGTTTACCA 11938 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||| || || || || ||||| || || || ||||| ||||| Sbjct 11939 GCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCTTTC 11998 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | || || || || || || | || || || || || || | ||| Sbjct 11999 ACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTATCGTTTTTCCGGTTAAAGTT 12058 Query 104543 TTTACAAATATCTGCAT 104559 ||||| || || ||||| Sbjct 12059 TTTACGAAAATTTGCAT 12075 >seq7856 Length=18030 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| || || |||||||| ||||| | || ||||| | |||||||||||| |||| Sbjct 6701 CTTTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAATTGTTTTCCAGCGAAAA 6642 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | | ||| ||||| ||||| |||||||| || || ||||| || ||||| ||||||| Sbjct 6641 TCAAACGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGCTTTGACATTTT 6582 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | || || || |||||||| | ||||| || ||||| || ||||| || |||| Sbjct 6581 CAATAGTGTCAGAAGCCTCTACCTCCAAGGTAATGGTTTTACCCGTCAGTGTCTTCACAA 6522 Query 104550 ATATCTGCATT 104560 | ||||||||| Sbjct 6521 AGATCTGCATT 6511 >seq1202 Length=288736 Score = 123 bits (136), Expect = 6e-23 Identities = 215/308 (70%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 238593 TGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTACGAATG 238652 ||||| | ||||| | || ||||| ||| ||| || ||||| | ||||| | ||| Sbjct 139885 TGGAACGCTGCCCAAAATCAGATGGTCAGAGAAGGAAAGATGCACGGGTTCTTGAGGATG 139944 Query 238653 TATTGGGCTAAAAAGATACTTGAATGGACTAGATCTCCAAAGGAAGCTCTTAGATATAGT 238712 || ||||| || || || | || |||||| || ||| |||| ||||| | | || Sbjct 139945 TACTGGGCCAAGAAAATTTTGGAGTGGACTCCGTCGCCAGAGGATGCTCT--GGCCTGGT 140002 Query 238713 --ATTTATCTGAACGATAAATACGAACTCGACGGTACGGATCCTAACGGATACGTAGGTT 238770 |||||||| || || || ||| | || || | ||||| || || || || || | Sbjct 140003 CGATTTATCTCAATGACAAGTACAGCATGGATGGAAGAGATCCCAATGGCTATGTTGGCT 140062 Query 238771 GTATGTGGTCAATATGTGGATTACACGAT-AGGGCATGGTCTGAGAGACCTATATTTGGA 238829 | |||||||| || ||||| | |||||| | ||| ||| || ||| || | ||||| Sbjct 140063 GCATGTGGTCTATTTGTGGCATCCACGATCAAGGC-TGGAAGGAAAGATCTGTGTTTGGT 140121 Query 238830 AAAGTTAGATACATGAATTATGAAGGAACTAAGAAAAAATTTGATGTAAATGCTTTTATC 238889 ||| |||| ||||||||||| |||| ||| ||| |||||||| || |||||| | Sbjct 140122 AAAATTAGGTACATGAATTACAAAGGCTGCGAGAGAAAGTTTGATGTTAAAGCTTTTGTT 140181 Query 238890 AGTAAATA 238897 || || || Sbjct 140182 AGAAAGTA 140189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151263328014448