Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq5523 212 7e-50 seq2487 140 4e-28 seq49 132 6e-26 >seq5523 Length=56759 Score = 212 bits (234), Expect = 7e-50 Identities = 483/717 (67%), Gaps = 26/717 (4%) Strand=Plus/Plus Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454 ||| |||||| |||||||| | ||||| || ||| ||| ||| ||||||| | Sbjct 40803 TGGGATTTTGCCAAAATGGGAATTGGTGGTCTTGATAAAGAGTTTAGCGATATTTTCCGT 40862 Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514 ||||| |||| ||||||| | |||| || || || || | || || |||||| Sbjct 40863 CGAGCTTTTGTTTCTAGAGTATATCCTCCAGACATTGTAGCGCAACTGGGTTGCAAACAT 40922 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 | || || ||||| | |||| || || ||| || |||||| | |||||||| Sbjct 40923 GTTAAGGGTATTTTGCTTTATGGTCCACCAGGTACAGGAAAAACACTCATGGCTCGTCAG 40982 Query 164575 ATTGCTCAAGCTTTTAAAT-CGCGACCCGTTAAAATTGTTAATGGTCCTGAA-TTATTGA 164632 || | | || | |||||| || || ||| || || |||||||| || || |||| Sbjct 40983 ATCGGT-AATATGTTAAATGCGAGAGAGCCTAAGATCGTCAATGGTCCGCAAATTCTTGA 41041 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 ||||||||||| ||| ||||| || | |||| ||||| || || ||||||| Sbjct 41042 T-AAATATGTAGGAGAGAGTGAAGCCAACATAAGAAGACTGTTTTCTGAAGCAGAAGAAG 41100 Query 164693 AACAAAAGAAAGC-AGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGAT 164751 || |||| ||||| || | ||| | ||| ||||| ||||||| ||||| ||| Sbjct 41101 AAGAAAA-AAAGCTTGGGCCAAACAGTGGGCTCCATATTATTATTTTTGACGAGATTGAT 41159 Query 164752 GCTCTTTGCAAAAAACGTGGT---------GATAATA---TTATTCATGATGCAGTGGTT 164799 ||| |||| ||| |||||| | ||||| | ||||||| | || || Sbjct 41160 GCTATTTGTAAATCTCGTGGTAGTGTTGCGGGTAATACTGGTGTTCATGACACTGTTGTG 41219 Query 164800 AATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGT 164859 |||||| |||| || ||||| |||||||| ||| | || |||||| | | | ||| Sbjct 41220 AATCAGCTGCTGTCAAAAATTGATGGTGTCGAACAGCTCAACAATATTCTGGTGATTGGT 41279 Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919 ||||| |||||| || | |||||||| ||| || |||| ||||||||| | ||| | Sbjct 41280 ATGACTAACCGAAAGGACATGATTGATGAAGCTCTACTACGTCCTGGTCGACTTGAACTT 41339 Query 164920 AAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCAT--G 164977 |||| ||||| | || || || || | || || |||| |||||||| | ||| Sbjct 41340 CAAATGGAAATCAGTTTGCCGGATGAAAACGGCCGATTTCAGATTTTAAATATCCATACA 41399 Query 164978 TGGCTAA--AATGAAATCCTGTGATATATTATCTCCCGATGTAGATTTAAATAAAATAGC 165035 | || | |||| | | | | | ||||| ||||| || || || || | || Sbjct 41400 TCGCGGATGCGTGAACAC----AAAAAAATGTCTCCAGATGTCGACTTGAAAGAATTGGC 41455 Query 165036 TGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGTAAGAGCCGCTCA 165092 | || ||||| | |||||| ||||| |||||||| || |||||||| ||||| Sbjct 41456 GATCCTTACAAAAAACTTTAGTGGCGCTGAGTTAGAGGGTTTGGTAAGAGCAGCTCA 41512 >seq2487 Length=14168 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 7175 TATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTT 7234 |||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 2562 TATACTGAGCTCCAAAATGTCTCCATTGAAATCCATAAATTGGACCTAAATCACCTTCTT 2503 Query 7235 CACGATGATTAAATCCTAATCGATTTAAATTAGATTTTGATCCATAAGCATCCCAAATAT 7294 | | || | |||||| | | || |||| | |||| | | |||||||||||| Sbjct 2502 CCCTATTCTGAAATCCAAGACTATCTAAAAATTCTCTTGAGCTGTTAGCATCCCAAATTC 2443 Query 7295 GTACAGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTT 7354 | ||| |||| || || | || ||| || ||||| | | |||||| ||||||| Sbjct 2442 GAACACCCTTTTCAGACAATGTATGAGCATTCGTTGATCCACTGATGAACCACAAAAGTT 2383 Query 7355 CTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAAT 7404 |||| |||| || ||| || | | ||||||||| | ||| || ||| Sbjct 2382 CTTCAACTACACCTTTCCAGAATACTGATTTTGTAGTTAGTAATGGAAAT 2333 >seq49 Length=129535 Score = 132 bits (146), Expect = 6e-26 Identities = 469/724 (65%), Gaps = 38/724 (5%) Strand=Plus/Minus Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454 ||| | |||| | ||||||| | ||||| || ||| ||| || ||||||| || Sbjct 129370 TGGGACTTTGCAAAAATGGGGATTGGTGGTCTCGATAAAGAGTTCAGCGCTATTTTCCGA 129311 Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514 ||||| ||||| || ||| | |||| || || || | | | ||||| | ||| Sbjct 129310 CGAGCGTTTGCCTCGAGAGTGTTCCCTACTGACATTATGACCCAGCTGGGCTGCAGACAC 129251 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 |||| |||||||| | |||| || || ||| || |||||| | |||||||| Sbjct 129250 GTAAAGGGAATTTTGCTTTATGGTCCACCGGGTACAGGAAAAACACTCATGGCTCGTCAA 129191 Query 164575 ATTGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGA-ATTAT 164629 || | | | | || || ||| || || || || || |||||||| | ||| | Sbjct 129190 ATCGGT-ACTATGTTGAA-CGCCAGAGAGCCC--AAGATCGTCAATGGTCCACAGATTCT 129135 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 ||| |||||||||||| ||| ||||| || | || | | ||||| || || || | Sbjct 129134 TGA-CAAATATGTAGGAGAGAGTGAAGCCAACATCAGGAGGCTGTTTGCTGAAGCAGAGG 129076 Query 164690 AAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAG 164749 |||| ||||||| || | ||| | ||| ||||| |||||||||| || | Sbjct 129075 AAGAGGAAAAGAAGCTTGGGCCAAACAGTGGGCTTCATATTATTATTTTTGATGAAATTG 129016 Query 164750 ATGCTCTTTGCAAAAAACGTGGT---------GATAATATTA---TTCATGATGCAGTGG 164797 | || | || ||| |||||| | ||| | | |||| || | || | Sbjct 129015 ACGCAATCTGTAAATCTCGTGGTAGTGTAGCTGGTAACACTGGGGTTCACGACACTGTCG 128956 Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857 | |||||| |||| || || || || ||||||||| | || |||||| | || | | Sbjct 128955 TGAATCAGCTGCTGTCAAAGATTGACGGTGTAGAACAACTCAACAATATTCTCGTTATTG 128896 Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917 |||||||||||||| || | |||||||| ||| | | || || ||||| | |||| Sbjct 128895 GTATGACCAACCGAAGAGACATGATTGATGAAGCTCTGCTGCGTCCAGGTCGGCTTGAAT 128836 Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATG 164977 | |||| || || | ||||| || || || | |||| ||||| || ||||| Sbjct 128835 TACAAATGGAGATCAGTTTACCGGATGAAACCGGGAGATTTCAGATTTTGAATATTCATA 128776 Query 164978 TGGCTAAAATGAAATCCTGTGA----TATATTAT--CTCCCGATGTAGATTTAAATAAAA 165031 | | |||| |||| ||| || |||| || || || | || | Sbjct 128775 CATCAAGAATG------CGTGAACACAATAAGATTGCTCCAGACGTTGACCTGAAAGAGC 128722 Query 165032 TAGC--TGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGTAAGAGCCGC 165089 |||| ||| || ||||| | ||||||||||| || ||||| || |||||||| || Sbjct 128721 TAGCAATGC--TCACCAAAAACTTCAGTGGTGCTGAGTTGGAGGGTTTGGTAAGAGCAGC 128664 Query 165090 TCAA 165093 ||| Sbjct 128663 ACAA 128660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595803802449600