Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq4162 122 8e-23 seq3638 122 8e-23 seq7856 102 7e-17 >seq4162 Length=60589 Score = 122 bits (134), Expect = 8e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | || ||||| ||||| | ||| || || | ||| | | Sbjct 56982 CGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCA 57041 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| | || ||||| ||||| ||||| ||||||||| Sbjct 57042 TCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTG 57101 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| ||| ||||| | ||||| || | |||||| Sbjct 57102 TCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATG 57161 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||||||| || |||||||| || || || ||||||| Sbjct 57162 GTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCATGC 57198 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 94763 TTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820 |||||| ||| ||| || ||||| | | |||| || || || | ||| || || | Sbjct 57406 TTTTTACGAAAATTTGCATGCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTT 57465 Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTA 94880 | || | |||||| ||| || || | ||||| || ||||| || | ||||| | Sbjct 57466 TCTGGATGTTATAGTCGGACAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGA 57525 Query 94881 ATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGA 94940 | ||||| ||||||||||| || || ||||| | ||| || || || || ||| Sbjct 57526 GACGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGA 57585 Query 94941 CAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000 ||||| | || || || | || ||||||||||| || ||||| ||||| |||| Sbjct 57586 TGGTGTCTGATGCTTCCACCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGA 57645 Query 95001 TCTGCAT 95007 ||||||| Sbjct 57646 TCTGCAT 57652 >seq3638 Length=67878 Score = 122 bits (134), Expect = 8e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | || ||||| ||||| | ||| || || | ||| | | Sbjct 11633 CGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCA 11692 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| | || ||||| ||||| ||||| ||||||||| Sbjct 11693 TCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTG 11752 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| ||| ||||| | ||||| || | |||||| Sbjct 11753 TCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATG 11812 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||||||| || |||||||| || || || ||||||| Sbjct 11813 GTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCATGC 11849 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | || || ||||| || | |||||| ||| | ||| | | Sbjct 11036 CGCAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTTCTTCCA 11095 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| |||||||| || | ||||| | | || || |||||||| || || |||||| Sbjct 11096 TCCTCGAGCTGTTTACCCGCGAAGATAAGACGCTGTTGGTCTGGAGGGATTCCCTCTTTG 11155 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| ||| || || | || || || | |||||| Sbjct 11156 TCCTGGATCTTAGCCTTGACGTTCTCGATGGTATCTGAAGCCTCAACTTCGAGGGTGATG 11215 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| ||||| || || ||||||||||| Sbjct 11216 GTTTTACCAGTCAGAGTCTTGACGAAGATCTGCAT 11250 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | || ||||| || || | ||| || || | ||| | | Sbjct 11264 CGCAAGACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGAGTTCTTCCA 11323 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || ||||| || | ||||| | | ||| || ||||| ||||||||||||||| Sbjct 11324 TCCTCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTG 11383 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| ||||||||| | | ||||| | || || || | |||||| Sbjct 11384 TCTTGAATTTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCTTCCACCTCCAGGGTGATG 11443 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || | || || || ||||||||||| Sbjct 11444 GTTTTACCGGTCAATGTCTTGACGAAGATCTGCAT 11478 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 94763 TTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820 |||||| ||| ||| || ||||| | | |||| || || || | ||| || || | Sbjct 12057 TTTTTACGAAAATTTGCATGCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTT 12116 Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTA 94880 | || | |||||| ||| || || | ||||| || ||||| || | ||||| | Sbjct 12117 TCTGGATGTTATAGTCGGACAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGA 12176 Query 94881 ATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGA 94940 | ||||| ||||||||||| || || ||||| | ||| || || || || ||| Sbjct 12177 GACGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGA 12236 Query 94941 CAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000 ||||| | || || || | || ||||||||||| || ||||| ||||| |||| Sbjct 12237 TGGTGTCTGATGCTTCCACCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGA 12296 Query 95001 TCTGCAT 95007 ||||||| Sbjct 12297 TCTGCAT 12303 >seq7856 Length=18030 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| |||||||| | || || || | ||||||||||||||||| ||||| || Sbjct 6667 ATCTTCCAATTGTTTTCCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATTCCTTCCTT 6608 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | |||||| || ||||| | | |||||||| || || || | || || Sbjct 6607 GTCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGCCTCTACCTCCAAGGTAAT 6548 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| || || || || ||||||||||||||||| Sbjct 6547 GGTTTTACCCGTCAGTGTCTTCACAAAGATCTGCAT 6512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448239893072160