Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_007804.2 Length=39104 Score E Sequences producing significant alignments: (Bits) Value seq356 210 5e-50 seq7820 116 9e-22 seq318 84.2 5e-12 seq301 80.6 7e-11 >seq356 Length=90444 Score = 210 bits (232), Expect = 5e-50 Identities = 418/615 (68%), Gaps = 8/615 (1%) Strand=Plus/Plus Query 25512 ACAATTCCAGCGAGCTGCTGGTATTAGCGAGGCGCTGGCCGCACGCTGGTTCTCGCATAT 25571 |||||| || || ||||| | |||| | | | || || |||||||| || || Sbjct 41869 ACAATTTCAAATGGCGGCTGGGTTAAGCGCCGAGTTAGCTGCGCGCTGGTTTCAGCCAAT 41928 Query 25572 AACTTCTGCGATGAAAGAGTTTGGTATCAGCAAAGCTGAAGATCAGGCAATGTTTATTGC 25631 | | ||||||||||||||| || |||| ||| | | ||| ||||| ||||| ||||| Sbjct 41929 CAGTGATGCGATGAAAGAGTTCGGCATCACCAAGCCGGTAGACCAGGCCATGTTCATTGC 41988 Query 25632 TCAGGTCGGGCATGAGTCTGGTGGTTTCATCCGGTTGCAGGAGAATTTCAACTACAGTGT 25691 |||| ||||||||||| || |||| |||| | ||||| || ||||||||||| || Sbjct 41989 GCAGGCTGGGCATGAGTCGACAGGGTTCACCCGGCTACAGGAAAACTTCAACTACAGCGT 42048 Query 25692 CACCGGACTGGCTAACTTCGTTCGGGCTGGGCGTCTCGCTCAGGGACAGGCCAACGCATT 25751 || | | || ||| |||| || || || || | || | ||||| ||| || Sbjct 42049 AGTGGGGTTAACAAATTTCATTCGTGCGGGACGCATCACACAAGACCAGGCTAACCAGTT 42108 Query 25752 GGGTCGCCGCGCAGGCGAACCTCCATTGCCACTCGAGCGCCAGAGAGCGATCGCCAATCT 25811 || ||||| | | || | |||| || | ||||| ||| | || || || || | Sbjct 42109 AGGCCGCCGACCTGAAGAGCGAGCATTACCGATTGAGCGTCAGCGTGCCATTGCTAACTT 42168 Query 25812 GGTGTACAGCAAACGCATGGGTAACAATGCTCCCGGCGATGGCTGGAATTACCGTGGGCG 25871 ||| |||||||||||| ||||||||||| || || ||||| ||||| ||||||| ||| Sbjct 42169 GGTCTACAGCAAACGCTACGGTAACAATGCGCCTGGTGATGGATGGAAATACCGTGCGCG 42228 Query 25872 CGGGCTTATCCAGATTACCGGTT--TGAATAACTATCGTGATTGCGGAAACGGTCTGAAG 25929 ||||| ||| || || ||| || ||||||| ||||| ||||| | | |||||| Sbjct 42229 TGGGCTCATCGGCATCAC--GTTCCTGGATAACTACCGTGACTGCGGCATTGCCCTGAAG 42286 Query 25930 GTTGACCTGCTGGAGAGCCCTGAATTGCTGGCGCATGACGAATATGCGGCTCGTAGCGCA 25989 ||||| ||| | || ||||| | | || | | ||||| || | ||||| Sbjct 42287 GTTGATCTGGTTCAGCAGCCTGAGCTATTAGCCGAGCCCATTTATGCAGCAAGGAGCGCG 42346 Query 25990 GCGTGGTTCTTTGCCAGCAAAGGATGCATGAAGTATACCGGCGA--TATTGCACGTGTAA 26047 || |||||||| | | || ||||| |||| ||| | | | | |||| |||| Sbjct 42347 GCATGGTTCTTCGTTACAAAGGGATGTCTGAACTATTCAGATAACCTGCTGCA--GGTAA 42404 Query 26048 CTCTGATTATCAATGGTGGCCGGAACGGCATCGACGACCGGCGCGCGCGGTACATCACTG 26107 | ||||||||||| || |||||| | || || || ||||| || | | | | Sbjct 42405 CGAAAATTATCAATGGCGGAACGAACGGACTTGAAGATCGTCGCGCTCGCTTCGGTAAGG 42464 Query 26108 CCAGTAAGGTGCTGG 26122 ||| | |||||||| Sbjct 42465 CCAAAACGGTGCTGG 42479 Score = 95.1 bits (104), Expect = 3e-15 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 37940 CGCTGGCATCGCTGGAAGCAGAGCCAGTTGCTTATATTTTCAAACATCCGGCCGGGAAAT 37999 ||||||||||||| ||||| ||||| ||||| || || ||||| |||||||| || | Sbjct 29477 CGCTGGCATCGCTCGAAGCGGAGCCTGTTGCGTACATCTTCAAGCATCCGGCAGGCAGGC 29418 Query 38000 TATTCTGGGCTTTAACGGATGAAAGCAATAAAGAGCAAGCGGACGTTATTCCTGTTTATG 38059 | |||||| | | || || || ||||| |||| |||| |||||||| || ||||| Sbjct 29417 TGTTCTGGTCACTTACTGACGAGAGCAACAAAGGGCAAAGCGACGTTATGCCGGTTTACT 29358 Query 38060 CCGCCCC 38066 |||| || Sbjct 29357 CCGCTCC 29351 >seq7820 Length=47423 Score = 116 bits (128), Expect = 9e-22 Identities = 153/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 20255 ATCACCACTACCTACGCCAATCGGTTGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCT 20314 ||||||||| || | ||||| || |||||||||||||||||| |||| | |||||| Sbjct 29674 ATCACCACTGCCAAGACCAATAGGCGGGTGGTGAACTGTGCAGGATTGGTCTTACCGGCC 29733 Query 20315 AAAAGGACCCGGCGCACCTTTCGGTGCCCCCACACAGCCCACCATAA--TACGAATGTGA 20372 || | |||| | | |||| | | ||||||||||||||||||| ||||||||| Sbjct 29734 TAACCG-TCCGGTGAGCTTTTCAGCTCTCCCACACAGCCCACCATAAATCGCGAATGTGA 29792 Query 20373 CCGTGCTATACGCATaaaaaaaCCGCTTGCGCGGTGAATGCGCCTTTTAGTAACCCGGGA 20432 | |||| |||| |||||||||||| ||||| ||||| | |||| |||||| Sbjct 29793 CTATGCTTAGCGCAAAAAAAAACCGCTCACGCGG-CTATGCGTCGATTAGGTTTCCGGGA 29851 Query 20433 CGCCAATCCCG-GCACTGGATTTTGC 20457 ||||||||| | || |||||||| Sbjct 29852 GACCAATCCCGATCGCT-GATTTTGC 29876 >seq318 Length=56543 Score = 84.2 bits (92), Expect = 5e-12 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2863 TGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCCAACTGAGCTA 2922 || ||||||||||||| ||||| || ||||||||||| |||||||| ||||||||||||| Sbjct 9505 TGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCTA 9564 Query 2923 A 2923 | Sbjct 9565 A 9565 >seq301 Length=62477 Score = 80.6 bits (88), Expect = 7e-11 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 25579 GCGATGAAAGAGTTTGGTATCAGCAAAGCTGAAGATCAGGCAATGTTTATTGCTCAGGTC 25638 || |||| ||||| || || | | | ||||| |||||||| |||||||| |||||||| Sbjct 11184 GCAATGACTGAGTTCGGCATTAACTACGCTGACGATCAGGCTATGTTTATCGCTCAGGTT 11125 Query 25639 GGGCATGAGTCTGGTGGTTTCA 25660 ||||||||||| ||||| |||| Sbjct 11124 GGGCATGAGTCCGGTGGCTTCA 11103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124997607844752