Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6822 221 8e-53 seq1952 131 1e-25 seq4162 123 2e-23 seq3638 123 2e-23 seq3727 104 2e-17 seq7856 93.3 3e-14 >seq6822 Length=22780 Score = 221 bits (244), Expect = 8e-53 Identities = 315/441 (71%), Gaps = 2/441 (0%) Strand=Plus/Plus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 ||||| | | | ||||| ||||| ||||| || || || || || || |||||||| Sbjct 16162 ATGGGTAGCTTAAACGTTAATCGCAATGTTAGCGATGCTTTTTATCGGTATAAAATGCCA 16221 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 | ||| ||||| ||||||||||| || || || |||||||| || ||||| || ||| Sbjct 16222 AGAATCCAAGCCAAAGTCGAGGGTAAAGGCAATGGCATTAAAACAGTTATTGTAAATATG 16281 Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341 |||||| ||||||||| | ||| | || || || || || || |||||||| || || Sbjct 16282 ATTGAAGTTGCTAAGGCGATTGGAAGACCGGCAACTTATCCCACTAAATATTTTGGCTGT 16341 Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCG 6401 ||| | || || || ||||| |||||| ||||| || || || |||||||| || || Sbjct 16342 GAATTGGGTGCACAAACGCAATTTGATTTTAAAAATGAACGATTTATCGTTAATGGCTCC 16401 Query 6402 CATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGT 6461 ||| | | || ||||| || || | || || || |||||| | |||| || ||||| Sbjct 16402 CATGAGGCAGCTAAGCTTCAAGATCTTCTGGATGGTTTTATTAGAAAGTACGTTTTGTGT 16461 Query 6462 CGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAGAAACACCATCTCT 6521 | || |||||||| || ||||| || | ||||| | || | | || || || Sbjct 16462 CCGGCGTGCGATAATCCAGAGACGGAATTAATTGTCAGCGCTAAAAAAGGAACGATATCA 16521 Query 6522 CAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGA-TTTATCACACAAACTCAACAC 6580 ||||||||||| || |||||| ||||||| |||||| || | ||||| | || || Sbjct 16522 CAGGGCTGCAAGGCTTGCGGTCACCATGGTTTGCTGGAGAGTAAC-CACAAGTTGAATAC 16580 Query 6581 CTTCATACTGAAGAATCCTCC 6601 | || ||||| ||||| || Sbjct 16581 TTATATTCTGAAAAATCCACC 16601 >seq1952 Length=126965 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 123892 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 123833 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 123832 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 123798 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||| |||| |||||||||||||||||||||||| | Sbjct 121869 CTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTC 121810 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||||||| Sbjct 121809 GCCCATATTTAGCCTT 121794 >seq4162 Length=60589 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| |||||||||||||| ||||||||| || ||||||||||| Sbjct 57198 CCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAG 57257 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | |||| | || |||| |||||| || || || || || |||||||| || | ||| Sbjct 57258 AGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGG 57317 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| ||||| || || |||||||| | | ||| ||| | || ||| Sbjct 57318 ATACCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACT 57377 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || ||||| || || || ||||| ||||| || |||||| Sbjct 57378 TCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 57425 >seq3638 Length=67878 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| |||||||||||||| ||||||||| || ||||||||||| Sbjct 11849 CCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAG 11908 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | |||| | || |||| |||||| || || || || || |||||||| || | ||| Sbjct 11909 AGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGG 11968 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| ||||| || || |||||||| | | ||| ||| | || ||| Sbjct 11969 ATACCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACT 12028 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || ||||| || || || ||||| ||||| || |||||| Sbjct 12029 TCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 12076 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | |||||| ||||| ||||| ||| || || || || ||||| || | Sbjct 11250 TACCACCACGAAGACGCAAGACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCCG 11309 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | | || || | |||||| || || || || || |||||||| || | | Sbjct 11310 AAAGAGTTCTTCCATCCTCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTG 11369 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| |||||| ||| || |||| | || || | ||| | Sbjct 11370 GAATACCTTCTTTGTCTTGAATTTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCTTCCA 11429 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || |||||||| ||||| || || ||||| |||||||| Sbjct 11430 CCTCCAGGGTGATGGTTTTACCGGTCAATGTCTTGACGAAGATCTGCAT 11478 >seq3727 Length=75275 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||| || | |||||| || |||| | Sbjct 27856 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGGTAAAAAATAGGGACGAAGGAGGTCTCAT 27915 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||| |||||||||||||||||||||||| Sbjct 27916 TAATCCATTCGTGCGCGTCACTAATTAGATGACGA 27950 >seq7856 Length=18030 Score = 93.3 bits (102), Expect = 3e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || || ||||| ||||||| | |||| | || || ||||||||||| || || Sbjct 6702 CCTTTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAATTGTTTTCCAGCGAAA 6643 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || | || || ||||| | || | ||||| ||||| |||||| || ||||| Sbjct 6642 ATCAAACGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGCTTTGACATTT 6583 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | ||| || | || || || || ||||| ||||||||||||| || ||||| Sbjct 6582 TCAATAGTGTCAGAAGCCTCTACCTCCAAGGTAATGGTTTTACCCGTCAGTGTCTTCACA 6523 Query 38307 AATATCTGCAT 38317 || |||||||| Sbjct 6522 AAGATCTGCAT 6512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334909823660636