Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3638 123 2e-23 seq7856 120 3e-22 seq4162 111 1e-19 seq1202 102 7e-17 >seq3638 Length=67878 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||||||| ||||||| | || ||||| | || Sbjct 11478 ATGCAGATCTTCGTCAAGACATTGACCGGTAAAACCATCACCCTGGAGGTGGAAGCTTCC 11419 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | ||| | |||| ||| ||||||||||| |||||||| ||||| Sbjct 11418 GACACCATTGAGAACGTCAAGGCCAAAATTCAA-GACAAAGAAGGTATTCCACCAGACCA 11360 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| || || || |||||| | || |||| | ||| | || ||||| Sbjct 11359 ACAACGTCTTATCTTCGCTGGTAAACAACTCGAGGATGGAAGAACTCTTTCGGACTACAA 11300 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || ||||||||||| || || || || Sbjct 11299 CATCCAGAAAGAATCCACCCTTCACTTGGT 11270 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| |||| || ||| ||||||| | ||||| || | || Sbjct 11847 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 11788 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||||||||| |||||||| ||||| Sbjct 11787 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 11728 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | || |||| | | ||| | || ||||| Sbjct 11727 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACAAC 11668 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || ||||||||||| || || || || || Sbjct 11667 ATCCAAAAAGAATCAACACTCCACTTGGT 11639 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| |||||| ||||||| ||||||| ||| | || Sbjct 11250 ATGCAGATCTTCGTCAAGACTCTGACTGGTAAAACCATCACCCTCGAAGTTGAGGCTTCA 11191 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || |||||| | ||| || ||| |||||||| || || || || |||||| Sbjct 11190 GATACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAA 11131 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || ||||| | || |||| | ||| | ||| || || Sbjct 11130 CAGCGTCTTATCTTCGCGGGTAAACAGCTCGAGGATGGAAGAACTCTCTCCGACTATAAC 11071 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || || || ||||| || || || || Sbjct 11070 ATCCAGAAGGAGTCCACCCTTCACTTGGT 11042 >seq7856 Length=18030 Score = 120 bits (132), Expect = 3e-22 Identities = 146/197 (74%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 |||||||| || ||||| ||||| |||| |||||| |||| || | || || ||| | Sbjct 6509 ACAATGCAGATCTTTGTGAAGACACTGACGGGTAAAACCATTACCTTGGAGGTAGAGGCT 6568 Query 25056 TCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 ||||||||||| || |||| |||| |||| ||| ||||| ||||| ||||| || Sbjct 6569 TCTGACACTATTGAAAATGTCA---AAGCTAAAATTCA-AGACAAGGAAGGAATTCCTCC 6624 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 || || ||||| | ||||| || || |||||||| ||||||| || ||| || || Sbjct 6625 AGATCAGCAGCGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGACGTACTCTGTCTGA 6684 Query 25172 TTACAATATTCAAAAAG 25188 ||||| || || |||| Sbjct 6685 CTACAACATCCAGAAAG 6701 >seq4162 Length=60589 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| |||| || ||| ||||||| | ||||| || | || Sbjct 57196 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 57137 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||||||||| |||||||| ||||| Sbjct 57136 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 57077 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | || |||| | | ||| | || ||||| Sbjct 57076 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACAAC 57017 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || ||||||||||| || || || || || Sbjct 57016 ATCCAAAAAGAATCAACACTCCACTTGGT 56988 >seq1202 Length=288736 Score = 102 bits (112), Expect = 7e-17 Identities = 203/298 (68%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 50988 AAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTC 51047 |||||| | || ||||| ||| ||||| ||||| ||| | ||||| | | ||| Sbjct 140163 AAACTTTCTCTCGCAGCCTTTGTAATTCATGTACCTAATTTTACCAAACACAGATCTTTC 140104 Query 51048 TTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTTAG 51106 || | | | || ||||| | || ||||| |||||||| || || ||||| || | Sbjct 140103 CTTCCA-GCCTTGATCGTGGATGCCACAAATAGACCACATGCAGCCAACATAGCCATTGG 140045 Query 51107 GATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATGT 51166 |||| | ||||||| |||||| | || || ||| | || | | ||| || | Sbjct 140044 GATCTCTTCCATCCATGCTGTACTTGTCATTGAGATAAATCGACCAGGCCAGAGCATCCT 139985 Query 51167 CTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGCA 51226 ||| || ||||| |||| ||||||||||||||||||||| | || | | ||||||| Sbjct 139984 CTGGCGACGGAGTCCACTCCAAAATTTTCTTGGCCCAGTACATCCTCAAGAACCCGTGCA 139925 Query 51227 TCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGTTTG 51284 |||| || || | | ||| ||| || | ||||||||| || || || || || Sbjct 139924 TCTTTCCTTCTCTGACCATCTGATTTTGGGCAGCGTTCCACAAATCATCATGGGTCTG 139867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433279645470140