Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_008464.1 Length=60238 Score E Sequences producing significant alignments: (Bits) Value seq7819 282 2e-71 seq300 190 8e-44 seq8198 91.5 6e-14 >seq7819 Length=39659 Score = 282 bits (312), Expect = 2e-71 Identities = 336/454 (74%), Gaps = 9/454 (2%) Strand=Plus/Plus Query 5327 ATTCTCGACCAGTTTCTGGATGAAAAAGAGGGTAACCACACTACGGCATACCGCGATGGT 5386 ||||||||||||||| ||||||| |||||||| || ||| || ||| ||||| Sbjct 10105 ATTCTCGACCAGTTTTTGGATGAGAAAGAGGGGAATAGTCTTACTGCGTACAAGGATGGA 10164 Query 5387 TCCGGCATCTGGACCATCTGTCGGGGGGCCACGATGGTGGATGGAAAACCCGTTTTTCCC 5446 ||||||||||| || || || || ||||| ||||| ||||| || | ||| | | Sbjct 10165 AGTGGCATCTGGACGATTTGCCGTGGTGCCACAATGGTTGATGGTAAGTCAGTTGTGCAG 10224 Query 5447 GGTATGAAACTGTCGAAGGAAAAATGCGACCAGGTCAACGCCATTGAGCGTGATAAGGCG 5506 || ||||| | || ||| |||||||||| |||| || ||||| || || |||||||| Sbjct 10225 GGCATGAAGTTAACGCAGGCAAAATGCGACAAGGTTAATGCCATCGAACGGGATAAGGCT 10284 Query 5507 CTGGCATGGGTGGAGAAAAACATCAAAGTGCCATTGAGCGAACCCCAGAAAGCGGGGATC 5566 ||||| ||||| || || |||||||| || ||| |||||| || ||||| || ||| Sbjct 10285 CTGGCGTGGGTTGACCGCAATATCAAAGTTCCTCTGACCGAACCTCAAAAAGCCGGAATC 10344 Query 5567 GCGTCATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAA 5626 || || ||||| ||||||||||| || || || || || ||||| |||||||| ||||| Sbjct 10345 GCATCTTTCTGCCCGTACAACATAGGCCCAGGCAACTGCTTCCCATCGACGTTCTATAAG 10404 Query 5627 CGAATTAATGCAGGTGATCGCAGGGGAGCGTGTGAGGCGATTCGCTGGTGGATTAAGGAC 5686 || ||||||| || || |||| || || || |||||||| || |||||||| || || Sbjct 10405 CGTCTTAATGCTGGCGACCGCAAAGGGGCCTGCGAGGCGATACGATGGTGGATAAAAGAT 10464 Query 5687 GGTGGCAGAGACTGCCG-----TATTCGTTCA-AACAA---CTGCTACGGTCAGGTATCC 5737 |||||| | |||||||| | | ||| || || |||||||| ||||| Sbjct 10465 GGTGGCCGTGACTGCCGACTAACAAAGGGTCAGAAGAATGGGTGCTACGGGCAGGTTGAA 10524 Query 5738 CGTCGTGACCAGGAGAGCGCGCTGTCATGCTGGG 5771 || ||||||||||| || ||||| | ||||||| Sbjct 10525 CGCCGTGACCAGGAAAGTGCGCTTGCCTGCTGGG 10558 >seq300 Length=47897 Score = 190 bits (210), Expect = 8e-44 Identities = 230/311 (74%), Gaps = 9/311 (3%) Strand=Plus/Minus Query 5478 AGGTCAACGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGC 5537 |||| ||||| ||||| || |||||||| | || ||||| || || |||||||||| Sbjct 11072 AGGTTAACGCTATTGAACGCGATAAGGCATTAGCCTGGGTTGACCGCAATATCAAAGTGC 11013 Query 5538 CATTGAGCGAACCCCAGAAAGCGGGGATCGCGTCATTCTGTCCGTACAACATTGGTCCCG 5597 | ||| || || ||||| | || || || || ||||| ||||| ||||| || |||| Sbjct 11012 CTCTGACAGAGCCACAGAAGGTAGGTATTGCATCCTTCTGCCCGTATAACATCGGCCCCG 10953 Query 5598 GTAAGTGTTTCCCGTCGACGTTTTATAAACGAATTAATGCAGGTGATCGCAGGGGAGCGT 5657 |||| || || || ||||| || ||| || || ||||||||||| |||| || || | Sbjct 10952 GTAAATGCTTACCCTCGACATTCTATCGGCGCATCAATGCAGGTGACCGCATCGGTGCAT 10893 Query 5658 GTGAGGCGATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTAT-----TCGTTC 5712 | || || || ||||||||||||||||||||||| |||| |||||| | | | Sbjct 10892 GCGAAGCAATCCGCTGGTGGATTAAGGACGGTGGACGAGATTGCCGTCTGACCAAAGGCC 10833 Query 5713 A-AACAA---CTGCTACGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGTCATGCT 5768 | || || |||||| |||||||| || ||||| ||||| ||||| ||| |||||| Sbjct 10832 AGAAGAATGGCTGCTATGGTCAGGTGGAACGACGTGATCAGGAAAGCGCTCTGGCATGCT 10773 Query 5769 GGGGTATCGAC 5779 |||| || ||| Sbjct 10772 GGGGGATAGAC 10762 >seq8198 Length=2870 Score = 91.5 bits (100), Expect = 6e-14 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 43979 TTGCGCTGTAATTCTTCAATTTCTGATGCTGAATCAATGATATCTGCCATCTTTCATTAA 44038 || ||||| | |||||||| |||| ||| | ||| ||||| || ||||| | || | Sbjct 2715 TTACGCTGAAGCTCTTCAATCTCTGCTGCGGTATCGATGATGTCGGCCATGGT-CAGTGC 2773 Query 44039 TCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGT 44098 |||| ||| ||| ||||||| || |||| |||||| || | ||||||||||| || | Sbjct 2774 TCCCGGAACTGTCGGTTAATTCGGTTGAAGGTGAACGCCAGCAATAAAAAAGGCCGCTTT 2833 Query 44099 AGCTCCCTGATGATTTTGCTTTTCATG 44125 ||| |||| |||||| ||||||| Sbjct 2834 AGCGACCTGGTGATTTGCGATTTCATG 2860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192619054734400