Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq304 91.5 1e-13 seq4162 86.0 4e-12 seq3638 86.0 4e-12 >seq304 Length=131104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 192/282 (68%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 84251 GCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTCCATACTTGTAAAAA 84310 ||| || || |||||||| ||||| || || |||||| | |||||||| || | || Sbjct 47623 GCCGCCAGGGAATTCCCAGTCGATATCCACGCCGTCGTAGAATTTCCAGGTCTGGAGGAA 47682 Query 84311 CTCCTTAACCGAATTTACAAAAACGTTTCTTTTTTCAACATTGTGCA--TGAAATAAAAC 84368 || ||||| || || ||| || | | | ||||| || || || | Sbjct 47683 TTCTTTAACGGAGCCAACGAAACGGTCACGCAGCACTTTGTCGTGCAGCTGGAAGAA--C 47740 Query 84369 GGGTCCGACAACGTCCATCCTCCTATGGACGGAAGAATCTTTAGGTGCGGGTTCGCCAAT 84428 ||||| || | ||||| || || ||||| || ||||| || ||| ||| | ||| | Sbjct 47741 GGGTCAGAAAGTGTCCAGCCACCGATGGATGGCAGAATTTTCAGGCCCGGATGCGCTTTT 47800 Query 84429 TT-AGCTGCCATCAATTGTCCAAAATTGCCTTTATACGGTTCGTTCCAAGCGGACACGCC 84487 || ||| ||||||| || || | | ||||| ||||| |||| ||| || |||||| Sbjct 47801 TTCAGC-GCCATCATCTGACCGTAGGTCCCTTTGTACGGGTCGTCCCAGTTGGTCACGCC 47859 Query 84488 CTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGGATGGC 84529 || || ||| | || | || ||||||||||||||||| || Sbjct 47860 TTTCTGTGGCATCTGCAGCGCAGCCCACGGATCGTGGATCGC 47901 >seq4162 Length=60589 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| ||||| || ||||| || ||| ||||| || || || Sbjct 57424 ATGCAAATTTTCGTAAAAACTTTAACCGGAAAAACGATAACCTTGGAAGTCGAGGCTTCA 57365 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || || || || ||| | || | ||||| Sbjct 57364 GACACTATTGAAAATGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAA 57305 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || ||||| ||||| ||||||||||||||| | || | | |||||||| Sbjct 57304 CAACGTCTCATCTTCGCTGGTAAACAACTAGAAGATGGACGTACCCTCTCTGATTACAAC 57245 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || ||||| || ||||||||| |||| | ||| | || || || Sbjct 57244 ATCCAAAAGGAGTCAACTCTTCATTTGGTTCTGCGTCTCCGTGGTGG 57198 >seq3638 Length=67878 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| ||||| || ||||| || ||| ||||| || || || Sbjct 12075 ATGCAAATTTTCGTAAAAACTTTAACCGGAAAAACGATAACCTTGGAAGTCGAGGCTTCA 12016 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || || || || ||| | || | ||||| Sbjct 12015 GACACTATTGAAAATGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAA 11956 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || ||||| ||||| ||||||||||||||| | || | | |||||||| Sbjct 11955 CAACGTCTCATCTTCGCTGGTAAACAACTAGAAGATGGACGTACCCTCTCTGATTACAAC 11896 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || ||||| || ||||||||| |||| | ||| | || || || Sbjct 11895 ATCCAAAAGGAGTCAACTCTTCATTTGGTTCTGCGTCTCCGTGGTGG 11849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358084837301224