Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3638 152 1e-31 seq7856 122 2e-22 seq4162 122 2e-22 >seq3638 Length=67878 Score = 152 bits (168), Expect = 1e-31 Identities = 187/254 (74%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 288223 TGGGATATGATGATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTT 288282 ||| | | ||||| | || || ||||| ||||| | | ||| | |||| ||| Sbjct 11000 TGGTAAACGATGAATGATTATTGACCACCACGGAGACGCAATACCAAGTGAAGGGTGGAC 11059 Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||||| ||| || | ||| || || | ||||| || |||||| Sbjct 11060 TCCTTCTGGATGTTATAGTCGGAGAGAGTTCTTCCATCCTCGAGCTGTTTACCCGCGAAG 11119 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||||||||| ||| |||||||| ||||| |||||||| || || || ||| Sbjct 11120 ATAAGACGCTGTTG---GTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTAGCCTTGACG 11176 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || |||||||| ||||| || || || |||||||||||| Sbjct 11177 TTCTCGATGGTATCTGAAGCCTCAACTTCGAGGGTGATGGTTTTACCAGTCAGAGTCTTG 11236 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 11237 ACGAAGATCTGCAT 11250 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| |||||| ||||| || ||||| | || || | ||| || || | |||| Sbjct 11276 TGAAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGAGTTCTTCCATCCTCGAGTTGT 11335 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||| ||||| ||||| ||| || |||||||| || || ||||| Sbjct 11336 TTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTG 11395 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || ||||| || || | ||| | ||| || || || ||||| || || |||||| Sbjct 11396 GCCTTGACGTTCTCAATGGTGTCGGAAGCTTCCACCTCCAGGGTGATGGTTTTACCGGTC 11455 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | ||||||||||| |||||||| Sbjct 11456 AATGTCTTGACGAAGATCTGCAT 11478 Score = 122 bits (134), Expect = 2e-22 Identities = 170/236 (72%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||||| | ||| | ||| ||||| ||||| ||||||| Sbjct 12073 CATG-CCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGT 12131 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | || | |||||| || | |||||| || |||||||| |||||||| || | Sbjct 12132 CGGACAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGG---T 12188 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| ||||| || || ||||| || || |||||||| ||||| || | || | Sbjct 12189 CTGGAGGAATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATG 12248 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || | || || || || || ||||||||||| ||||| ||||||||| Sbjct 12249 CTTCCACCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATT 12304 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||| | || || | || || || | || || || ||||| Sbjct 11656 TTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCATCCTCAAGCTGCTTACCAGCGAA 11715 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || ||||| || ||| ||||||||||| |||||||| || || || ||||| Sbjct 11716 GATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACGTT 11775 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| | ||| ||||| || ||||| || || || |||||||| ||||| Sbjct 11776 CTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCCGTCAGAGTTTTGAC 11835 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 11836 GAAAATTTGCAT 11847 >seq7856 Length=18030 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| ||||| || ||||| | || || ||||| ||||| ||||||||||| ||||| | Sbjct 6701 CTTTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAATTGTTTTCCAGCGAAAA 6642 Query 288344 TCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400 ||| |||||| || |||| || |||||||| || || || ||||| ||||| || | Sbjct 6641 TCAAACGCTGCTG---ATCTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGCTTTGACAT 6585 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 |||| |||| || | ||||| || | || || || || || ||||| ||||| | Sbjct 6584 TTTCAATAGTGTCAGAAGCCTCTACCTCCAAGGTAATGGTTTTACCCGTCAGTGTCTTCA 6525 Query 288461 CGAATATCTGCATT 288474 | || ||||||||| Sbjct 6524 CAAAGATCTGCATT 6511 >seq4162 Length=60589 Score = 122 bits (134), Expect = 2e-22 Identities = 170/236 (72%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||||| | ||| | ||| ||||| ||||| ||||||| Sbjct 57422 CATG-CCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGT 57480 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | || | |||||| || | |||||| || |||||||| |||||||| || | Sbjct 57481 CGGACAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGG---T 57537 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| ||||| || || ||||| || || |||||||| ||||| || | || | Sbjct 57538 CTGGAGGAATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATG 57597 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || | || || || || || ||||||||||| ||||| ||||||||| Sbjct 57598 CTTCCACCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATT 57653 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||| | || || | || || || | || || || ||||| Sbjct 57005 TTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACCATCCTCAAGCTGCTTACCAGCGAA 57064 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || ||||| || ||| ||||||||||| |||||||| || || || ||||| Sbjct 57065 GATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACGTT 57124 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| | ||| ||||| || ||||| || || || |||||||| ||||| Sbjct 57125 CTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCCGTCAGAGTTTTGAC 57184 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 57185 GAAAATTTGCAT 57196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179516013267768