Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_010237.1 Length=63395 Score E Sequences producing significant alignments: (Bits) Value seq7819 291 3e-74 seq300 212 3e-50 seq7820 143 1e-29 seq8198 93.3 2e-14 seq356 91.5 6e-14 >seq7819 Length=39659 Score = 291 bits (322), Expect = 3e-74 Identities = 349/472 (74%), Gaps = 9/472 (2%) Strand=Plus/Plus Query 27786 GGTGCTTCTGCGCCTGAAATCCTCGACCAGTTTCTGGATGAAAAGGAAGGTAACCACACC 27845 || ||||| || || |||| |||||||||||| ||||||| || || || || Sbjct 10087 GGCGCTTCGGCCCCAAAAATTCTCGACCAGTTTTTGGATGAGAAAGAGGGGAATAGTCTT 10146 Query 27846 ACAGCATACCGTGATGGTGCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGAT 27905 || || ||| ||||| || |||||||| || |||||||| ||||| ||| ||| Sbjct 10147 ACTGCGTACAAGGATGGAAGTGGCATCTGGACGATTTGCCGTGGTGCCACAATGGTTGAT 10206 Query 27906 GGTAAGCCTGTTATTCCTGGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCC 27965 |||||| | ||| | | ||||||||| | || ||| |||||||||| |||||| ||| Sbjct 10207 GGTAAGTCAGTTGTGCAGGGCATGAAGTTAACGCAGGCAAAATGCGACAAGGTTAATGCC 10266 Query 27966 ATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCGCTGACCGAA 28025 || || || |||||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct 10267 ATCGAACGGGATAAGGCTCTGGCGTGGGTTGACCGCAATATCAAAGTTCCTCTGACCGAA 10326 Query 28026 CCCCAGAAAGCGGGGATCGCGTCATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTTC 28085 || || ||||| || ||||| || ||||| ||||||||||| || || || || || ||| Sbjct 10327 CCTCAAAAAGCCGGAATCGCATCTTTCTGCCCGTACAACATAGGCCCAGGCAACTGCTTC 10386 Query 28086 CCGTCGACGTTTTACAGACGAATTAATGCAGGTGATCGAAAAGGTGCCTGCGAAGCTATT 28145 || |||||||| || | || ||||||| || || || ||||| |||||||| || || Sbjct 10387 CCATCGACGTTCTATAAGCGTCTTAATGCTGGCGACCGCAAAGGGGCCTGCGAGGCGATA 10446 Query 28146 CGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCG-----TATTCGTTCA-AACAA---C 28196 || |||||||| || || |||||| | |||||||| | | ||| || || Sbjct 10447 CGATGGTGGATAAAAGATGGTGGCCGTGACTGCCGACTAACAAAGGGTCAGAAGAATGGG 10506 Query 28197 TGTTACGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTGGG 28248 || ||||| ||||| || ||||||||||| || ||||| || ||||||| Sbjct 10507 TGCTACGGGCAGGTTGAACGCCGTGACCAGGAAAGTGCGCTTGCCTGCTGGG 10558 >seq300 Length=47897 Score = 212 bits (234), Expect = 3e-50 Identities = 450/661 (68%), Gaps = 32/661 (5%) Strand=Plus/Minus Query 27611 CAGTGGGCGGCAATAGGCGTGCTGGGGAGTCTGCTGTTTGGGCTGCTGACATATCTGACG 27670 |||||||| || ||||| || | || ||| | || || || |||| || | ||| || Sbjct 11405 CAGTGGGCAGCTATAGGTGTAATCGGTAGTTTACTTTTCGGCTTGCTTACCTTTCTTACC 11346 Query 27671 AACCTGTATTTCAAGATTAAAGAAGACCGGCGTAAGGCGGCACGGGGAGAGTAAGCTGAT 27730 || || || ||| | || |||| || || || || || || ||||| || ||| || Sbjct 11345 AATCTCTACTTCCAAATCAAAGCGGATCGCCGCAAAGCTGCGCGGGGTGAATAA--TGTC 11288 Query 27731 GAGCAGGAAACTCCGCTATGGTTTATCGGCTGCCGTTCTGGCGCTGATTGCCGCAGGTGC 27790 || || || || | || | || | || || ||| |||| || || ||||||| Sbjct 11287 GAACA---AA----GCCAAACTT-AGCG-CAGCAGTGCTGACGCTAATCGCGTCAGGTGC 11237 Query 27791 TTCTGCGCCTGAAATCCTCGACCAGTTTCTGGATGAAAAGGAAGGTAACCACACCACAGC 27850 | ||| || || |||||||||| | || || ||||| || | | | Sbjct 11236 ATGTGCTCCACTCATTTTCGACCAGTTCATCAGCGAGAAAGAAGGCAATA----CGCTGG 11181 Query 27851 ATACCGT-GATGGTGCGGGTA---TCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATG 27906 |||| | || | ||||| ||||| | | || | ||| | ||| | |||| Sbjct 11180 TGGCCGTTGTTGATCCGGGTGGGGTCTGGTCTTTATGTCATGGTGTGACCGTCATCGATG 11121 Query 27907 GTAAGCCTGTTATTCCTGGCATGAAG--CTGTCGAAGGAAAAATGCGACCGGGTTAACGC 27964 | | || |||| || ||||||| | | || ||||| | ||| ||||||||| Sbjct 11120 GCAGGCGTGTTGTTAAAGGCATGACGGCCAGTG--AGGAACAGTGCCGAGAGGTTAACGC 11063 Query 27965 CATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCGCTGACCGA 28024 ||||| || |||||||| | || ||||| || || ||||||||||| ||||| || Sbjct 11062 TATTGAACGCGATAAGGCATTAGCCTGGGTTGACCGCAATATCAAAGTGCCTCTGACAGA 11003 Query 28025 ACCCCAGAAAGCGGGGATCGCGTCATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTT 28084 || ||||| | || || || || ||||| ||||| ||||| || |||||||| || || Sbjct 11002 GCCACAGAAGGTAGGTATTGCATCCTTCTGCCCGTATAACATCGGCCCCGGTAAATGCTT 10943 Query 28085 CCCGTCGACGTTTTACAGACGAATTAATGCAGGTGATCGAAAAGGTGCCTGCGAAGCTAT 28144 || ||||| || || | || || ||||||||||| || | ||||| |||||||| || Sbjct 10942 ACCCTCGACATTCTATCGGCGCATCAATGCAGGTGACCGCATCGGTGCATGCGAAGCAAT 10883 Query 28145 TCGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTAT-----TCGTTCA-AACAA--- 28195 ||||||||||||||||||||||| |||| |||||| | | || || || Sbjct 10882 CCGCTGGTGGATTAAGGACGGTGGACGAGATTGCCGTCTGACCAAAGGCCAGAAGAATGG 10823 Query 28196 CTGTTACGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTGGGGAATCGA 28255 ||| || |||||||| || ||||| ||||| ||||| ||||| |||||||| || || Sbjct 10822 CTGCTATGGTCAGGTGGAACGACGTGATCAGGAAAGCGCTCTGGCATGCTGGGGGATAGA 10763 Query 28256 C 28256 | Sbjct 10762 C 10762 >seq7820 Length=47423 Score = 143 bits (158), Expect = 1e-29 Identities = 140/178 (79%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 19453 GCAAAATCTGGCGTCGGGATTAGCACCCCGGATATCGAAACGGTGCATAACCGCGCTGGC 19512 |||||||| | |||||||| | |||||| | | || || ||||| ||||| || Sbjct 29876 GCAAAATCAGCGATCGGGATTGGTCTCCCGGAAACCTAATCGACGCATAGCCGCGTGAGC 29817 Query 19513 GGTTTTTTAT-GCGCTAAGCACAGTCACATTCGCGATTTATGGCGGGCTGTGTGGGGGGA 19571 |||||||| | |||||||||| ||||||||||||||||||||| ||||||||| ||| || Sbjct 29816 GGTTTTTTTTTGCGCTAAGCATAGTCACATTCGCGATTTATGGTGGGCTGTGT-GGGAGA 29758 Query 19572 GCCGAAAGGCTCGCCGGATGTTTCGACCGGTAGTGCTAACCCCGCACAGTTCGCCACC 19629 || |||| |||| ||||| | || | |||||| | || || ||||||||| ||||| Sbjct 29757 GCTGAAAAGCTCACCGGACGGTTAGGCCGGTAAGACCAATCCTGCACAGTTCACCACC 29700 Score = 118 bits (130), Expect = 4e-22 Identities = 97/117 (83%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 19917 AATGCCC-GCTCCCTCATCCTCTGGACAGAACGAGGCGCAGCCCGTCACGCAAAAATGCT 19975 |||| || | |||||||||||||||||||| |||||||| || || || ||||||||||| Sbjct 29412 AATGACCAGATCCCTCATCCTCTGGACAGAGCGAGGCGCTGCTCGCCATGCAAAAATGCT 29353 Query 19976 CGAAACTGATCAGGCGTGGGATGTGTTCGAAAGACTGGAAGACTGCTATTTCAGCCA 20032 ||| | || || || ||||| || ||||||| ||||||||| || ||||||| ||| Sbjct 29352 GGAATCAGACCAAGCTTGGGAAGTATTCGAAAAACTGGAAGATTGTTATTTCAACCA 29296 >seq8198 Length=2870 Score = 93.3 bits (102), Expect = 2e-14 Identities = 110/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 5044 GTTGCGCTGTAATTCTTCAATTTCTGATGCTGAATCAATGAGGTCTGCCATCTTTCATTA 5103 ||| ||||| | |||||||| |||| ||| | ||| |||| ||| ||||| | || | Sbjct 2714 GTTACGCTGAAGCTCTTCAATCTCTGCTGCGGTATCGATGATGTCGGCCATGGT-CAGTG 2772 Query 5104 ATCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTG 5163 |||| ||| ||| ||||||| || |||| |||||| || | ||||||||||| || Sbjct 2773 CTCCCGGAACTGTCGGTTAATTCGGTTGAAGGTGAACGCCAGCAATAAAAAAGGCCGCTT 2832 Query 5164 TAGCTCCCTGATGATTTTGCTTTTCATG 5191 |||| |||| |||||| ||||||| Sbjct 2833 TAGCGACCTGGTGATTTGCGATTTCATG 2860 >seq356 Length=90444 Score = 91.5 bits (100), Expect = 6e-14 Identities = 161/232 (69%), Gaps = 17/232 (7%) Strand=Plus/Plus Query 20652 AGCGAGACAGCATTATTGTCGTCGCTCAGTTGTCGCCGGAATTCACCGCTCGCCTTGTTG 20711 ||||||| ||| | | ||||||| ||| ||| ||||| || ||||| || || |||| Sbjct 38242 AGCGAGATAGCTATGTGATCGTCGCCCAGCTGTGCCCGGAGTTTACCGCCCGTCTGGTTG 38301 Query 20712 ACCGCTGGCGAGAACTCGA---AGGGGC---AACCGCGAAAATACCACAAACCTTTTCTG 20765 ||||||||| ||||| || ||||| || ||| |||| ||||| | ||| Sbjct 38302 ACCGCTGGCAGGAACTGGAGAGCGGGGCAGGAATGGCG---GTACCGCAAACACTCCCTG 38358 Query 20766 AGGCATTGCGCCTTGCGGCCGACCTTGAAGACCAGAAG----GCTGAACTGGAGAAACAG 20821 | ||| | ||||| || |||||||||| || |||||| || | || ||| Sbjct 38359 AAGCACTCCGCCTCGCTGCCGACCTTGCCGAACAGAAGCAACGCCTGAGTGATGAA---- 38414 Query 20822 CTTGCTCTCGCAGCACCTAAAGTTGAGTTTGCCGATCGCGTTGGCGAGGCCA 20873 ||||| | ||||| ||||| | ||| |||| |||||| || | |||||| Sbjct 38415 CTTGCCATAGCAGCGCCTAAGGCTGAATTTGTTGATCGCTATGTCAAGGCCA 38466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202716576586096