Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_011103.1 Length=60195 Score E Sequences producing significant alignments: (Bits) Value seq356 104 9e-18 >seq356 Length=90444 Score = 104 bits (114), Expect = 9e-18 Identities = 419/652 (64%), Gaps = 11/652 (2%) Strand=Plus/Plus Query 532 AAGCCGATGACCCGCGGCGAGCGCGTTATTGCGTTCATCGAGCGGTACTGTCTCGTGCCA 591 ||| | ||||| || || ||||| || || |||||||| ||||| | || ||||||| Sbjct 47519 AAGACTATGACGCGAGGTGAGCGTGTAATAGCGTTCATTGAGCGCTTTTGCATCGTGCCG 47578 Query 592 GAAGGCACCCTGCTCGGCAAGCCGGTGAAGCTTCTGCCGTTTCAGCGCAAATTCATCCTG 651 ||||||| || ||||| |||| || | | || |||||| | ||||||||| Sbjct 47579 GAAGGCAAGCTTATCGGCCAGCCTATGCGGTTGGACCCCTTTCAGAAAGATTTCATCCTG 47638 Query 652 GCTGTCTACGATAACCCCGCGGGCACGTCCCGCGCGTATCTGTCGATCGCCCGTAAGAAC 711 || || ||||| || || || || ||| ||| || |||||||| || ||| Sbjct 47639 GCGGTTTACGACAATCCAGCCGGAACGGATATGGCGATCCTCAGCATCGCCCGAAAAAAC 47698 Query 712 GGCAAGACGGGTTTGATTGCCTGCTTGCTATTGGCGCACATCGTTGGCCCTGAAGCTTAT 771 || || || || || || || | | || |||| ||| | || || |||||||| Sbjct 47699 GGTAAAACAGGATTAATCGCTGGAATCCTCCTGGCTCACTTGGTGGGGCCTGAAGCGGTC 47758 Query 772 CAGAACGGTCGCATCGTCTCCGGCGCGCGTTCGCGCAAGCAGGCTGCCGAGGTTTTCAAC 831 |||||| | || ||| |||||| | | || | ||||| ||| ||||| ||| Sbjct 47759 CAGAACACGCAGATTGTCAGCGGCGCACTTAGCCGGGAACAGGCGGCCATCGTTTTTAAC 47818 Query 832 TACGCCGCCAAAATGGTGATGATGTCGACGGAGCTAAGCA--AGCTCGCGCGCATCGTGC 889 ||| | || ||||| | || | |||| ||| || | | | ||| || Sbjct 47819 CTCGCGGTGAAGATGGTCAACCTGAACCCTAAGCT--GCAGGAGATTGTTCACATTACGC 47876 Query 890 C-ATCGGCGAAGATGATCGTCGGCCTTGCCAAG-AACGTCGAATACCAGGCGAGCTCGGC 947 | | |||| || | | | | || ||||| | |||||||||||| |||| || || Sbjct 47877 CAAGCGGC-AAAAAGCTGATTGG-TTTGCCGTGTAACGTCGAATACAAGGCTTTATCCGC 47934 Query 948 GGAAGCCAAGAGCGCGCACGGCGGCTCGCCCATTCTGGCTATTCTCGACGAGGTTGGCCA 1007 |||| |||| |||| ||| || ||||||||||| ||||| || || || || Sbjct 47935 AGAAGGTAAGACGACGCATGGCCTTTCCCCCATTCTGGCCATTCTTGATGAAACCGGGCA 47994 Query 1008 GATCAAAGGACCGACCGACGATTTCGTTGAGGCGATCGAAACATCGCAGGGCGCCTACGA 1067 | | | ||||| || ||||| | || || || || ||||||| || | || Sbjct 47995 GGTAAGGGGACCACAGGATGATTTTATCGATGCAATAACTACCGCGCAGGGGGCGCATGA 48054 Query 1068 AGGGCGCGCGATGTTGTTCGCCATCTCGACGCAAGCGGCGACGGACAACGATCTGTTTTC 1127 | | || || || | | |||| ||||| || || | ||| ||| ||| | Sbjct 48055 ---GAACCCGCTGCTGGTTGTCATCAGTACGCAGGCAGCAAATGACGCCGACCTGCTGAG 48111 Query 1128 GCGCTGGATTGACGACGCCGAGACGTCGAAGGATCCGCGCATTGTAAGCCAC 1179 ||||||||| || || | | ||||| || |||| ||| || ||||| Sbjct 48112 CATCTGGATTGATGATGCAGTCAAATCGAAAGACCCGCACATCGTGTGCCAC 48163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192481469695304