Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq8763 390 4e-104 seq356 167 7e-37 seq6374 127 6e-25 seq7327 109 2e-19 seq300 89.7 2e-13 >seq8763 Length=1737 Score = 390 bits (432), Expect = 4e-104 Identities = 271/306 (89%), Gaps = 1/306 (0%) Strand=Plus/Minus Query 370 CAGAAAGTCGAGCATACAAGCCCTGATGGCAGCATGACGCCGCAGCCAACAATCATCCAG 429 |||| ||||| || ||| | ||||||| | ||||||||| ||||| || ||||||||| Sbjct 306 CAGATTGTCGATCACACATCCTCTGATGGAACCATGACGCCACAGCCGACCATCATCCAG 247 Query 430 CTACTGCCTGTTGAGCC-AAAGCATGAGTAACGCCGTTCAATTGCCGATCCCCGCGAAGC 488 ||||| || |||||||| ||||||||| ||| ||||||||| ||||||||||||| |||| Sbjct 246 CTACTCCCCGTTGAGCCGAAAGCATGACTAATGCCGTTCAACTGCCGATCCCCGCTAAGC 187 Query 489 TTGCGCCACTGTTCACTGCGGTGAATAAGCGTTATCGATGCTCGCACGGTGGACGTGGCA 548 ||||||||||||||||||| |||||||||||||| || |||||||| ||||| ||||| | Sbjct 186 TTGCGCCACTGTTCACTGCCGTGAATAAGCGTTACCGGTGCTCGCATGGTGGTCGTGGTA 127 Query 549 GCGCCAAGACGCGCACATTTGCCCTGATGACTGCCGTAAAGGCGTATCAGTCGATGATGA 608 |||||||||||||||| || || || ||||| ||||||||||| || ||||||||||||| Sbjct 126 GCGCCAAGACGCGCACCTTCGCACTTATGACAGCCGTAAAGGCTTACCAGTCGATGATGA 67 Query 609 ACGGTGAAAGCGGCGTGGTGCTATGCGCGCGTGAGTTCATGAACTCGCTGGAAGAGTCGA 668 ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 66 ACGGTGAGAGCGGCGTGGTCCTCTGCGCGCGTGAGTTCATGAACTCGCTGGAAGAGTCGA 7 Query 669 GCATGC 674 |||||| Sbjct 6 GCATGC 1 >seq356 Length=90444 Score = 167 bits (184), Expect = 7e-37 Identities = 124/145 (86%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 28510 GCGGCGTAGACCGGCATAACATCGTTTTGTCCTTTATTGCTTTCGTCAGTAAGCGACCAA 28569 |||| ||| ||||||||||| ||| |||| ||||| ||||| ||||||||||| ||||| Sbjct 29354 GCGGAGTAAACCGGCATAACGTCGCTTTGCCCTTTGTTGCTCTCGTCAGTAAGTGACCAG 29413 Query 28570 AATAATTCTCCTGCTGGATGCTTGAAAATGTACGCTACAGGCTCCGCTTCGAGCGATGCC 28629 || | ||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 29414 AACAGCCTGCCTGCCGGATGCTTGAAGATGTACGCAACAGGCTCCGCTTCGAGCGATGCC 29473 Query 28630 AGTGCGATACGCGCCAGTTCACGCA 28654 || |||||||||||||| || |||| Sbjct 29474 AGCGCGATACGCGCCAGCTCTCGCA 29498 >seq6374 Length=224763 Score = 127 bits (140), Expect = 6e-25 Identities = 405/619 (65%), Gaps = 12/619 (2%) Strand=Plus/Plus Query 25190 GCTGCTGGCACTGATACCCGTAGAGGATGTGTGGGGTGTCGGTAGGCGTATCAGCAAG-A 25248 |||||| ||||| || || || || | ||||| || || | ||||| ||| | | Sbjct 212861 GCTGCTTTCACTGCAGCCGGTCGAAGAGATCTGGGGCGTGGGAAACCGTATT-GCACGCA 212919 Query 25249 AGCTCAATGCCATGGGAATCAAAACGGCTCTGGATCTCTCAGAGCAAAGCACCTGGATT- 25307 ||||||||| |||| |||| || || || ||||| | | | | ||| || | Sbjct 212920 AGCTCAATGTACTGGGCATCAGGACCGCGCTCGATCTGGCCCTG--ACGAACCCGGCCTT 212977 Query 25308 -ATCCGCAAGCACTTTAATGTGGTACTGGAACGAACGGTCCGGGAGCTGCGTGGCGAACC 25366 ||||| || | ||| || || || || ||||| || || || ||| || ||| Sbjct 212978 CATCCGTAAAAATTTTTCCGTCGTTCTCGAGCGAACAGTACGTGAACTGAACGGGGAAAG 213037 Query 25367 ATGTCTGGATCTGGAGGAGTTTGCGCCGGCAAAGCAGGAAATCGTCTGCAGCCGGTCATT 25426 ||| || || ||||| | | || | || ||| | || ||||||||||| || Sbjct 213038 CTGTATGTCGCTTGAGGAAGCTCCACCAACTAAACAGCAGATTGTCTGCAGCCGCAGCTT 213097 Query 25427 CGGAGAACGCGTTACCGAATACGAACAGATGCGCCAGGCTATCTG-CAGTTATGCTGCCC 25485 ||||| | || || ||||| | | |||||||| ||||| ||| || || | | Sbjct 213098 TGGAGAGAAAATCACGGAGTACGATTCGCTCCGCCAGGCGATCTGTCAG-TACGCAGAAC 213156 Query 25486 GTGGTGCTGAAAAACTACGTGGTGAGCACCAGTATTGCCGTTTTATCTCGGCGTTCGTCA 25545 | | ||||||| || ||| ||||||||||||||||| ||| || | || ||| Sbjct 213157 GGGCCTCTGAAAAGCTGCGTAAAGAGCACCAGTATTGCCGGCATATTTCTGTTTTTATCA 213216 Query 25546 AGACGTCACCGTTCGCGCTTAACGAGCCGTATTACGGCAATTGCGCGTCAGTGAAGCTTC 25605 | ||||| |||||||| | || || || || |||||||| || | | ||| || | Sbjct 213217 AAACGTCTCCGTTCGCCGTCAAAGAACCTTACTACGGCAACGTGGCCACGGAGAAACTGC 213276 Query 25606 TCACACCCACGCATGATTCCCGCGACATCATCAACGCTGTTGTTAAGTGCCTGGACAAAA 25665 | || ||||| || || |||| ||||| || || | | | | ||||| | Sbjct 213277 TTACCCCCACTCAGGACACCCGGGACATTATTGCGGCCGCTACAACGGCTCTGGAGCGTA 213336 Query 25666 TCTGGCAGGATGGGCACCGCTA--CCAAAAGGCTGGCATTATGCTCGGGGATTTCTTTAG 25723 ||||| ||||||||||||| || ||||| || || | ||||| || ||| | Sbjct 213337 TCTGGAAGGATGGGCACCGGTATGCCAAA--GCCGGTGTGATGCTGAATGACTTCACCTG 213394 Query 25724 CCAGGGTGTCGCACAGCTTAACCTGTTTGATGACAATGCCCCACGTGCTGGCAGCGAGAA 25783 | || || | ||||| | ||||| || || | | |||||| || ||||| | Sbjct 213395 CTCCGGCGTTTCGCAGCTGCAGCTGTTCGACGAACGTCCGCCACGTCCTCACAGCGCTGA 213454 Query 25784 GCTGATGGAGGTGCTGGAT 25802 ||||||| |||| || ||| Sbjct 213455 GCTGATGAAGGTTCTTGAT 213473 >seq7327 Length=51241 Score = 109 bits (120), Expect = 2e-19 Identities = 251/370 (68%), Gaps = 10/370 (3%) Strand=Plus/Minus Query 25392 CCGGCAAAGCAGGAAATCGTCTGCAGCCGGTCATTCGGAGAACGCGTTACCGAATACGAA 25451 ||| |||| ||| | || |||| ||||| || || || || || || | || ||| Sbjct 41369 CCGCCAAAACAGCAGATTATCTGTAGCCGATCCTTTGGGGAGCGTGTCATGACGTATGAA 41310 Query 25452 CAGATGCGCCAGGCTATCTG-CAGTTATGCTGCCCGTGGTGCTGAAAAACTACGTGGTGA 25510 ||||||||||| | || |||| | |||| |||| |||||||| || || || || Sbjct 41309 GCCATGCGCCAGGCAGTTTGTCAGT-ACGCTGAGCGTGCAGCTGAAAAGCTGCGCGGCGA 41251 Query 25511 GCACCAGTATTGCCGTTTTATCTCGGCGTTCGTCAAGACGTCACCGTTCGCGCTTAACGA 25570 || |||| ||| | ||| | | || || ||||||||||||||||| | ||||| Sbjct 41250 GCGTCAGTTCTGCAGGCATATTGCCGTTTTTGTGAAGACGTCACCGTTCGCTGTGAACGA 41191 Query 25571 GCCGTATTACGGCAATTGCGCGTCAGTG--AAGCTTCTCACACCCACGCATGATTCCCGC 25628 ||||||||||| || || | | ||||| ||||| | || ||| |||| ||| || | Sbjct 41190 ACCGTATTACGGGAA-TGTG-GCCAGTGAAAAGCTGATGACTCCCTCGCAGGATACCAGG 41133 Query 25629 GACATCATCAACGCTGTTGTTAAGTGCCTGGACAAAATCTGGCAGGATGGGCACCGCTAC 25688 |||||||| ||| | || || ||||| |||||| | |||| || | || Sbjct 41132 GACATCATAGCCGCAGCGGTGAAAGCACTGGATCGGATCTGGGTGAATGGCCATCTATAT 41073 Query 25689 CAAAAGGCTGGCATTATGCTCGGGGATTT--CTTTAGCCAGGGTGTCGCACAGCTTAACC 25746 ||| || || |||||| ||||| || || |||| ||| ||||| |||| Sbjct 41072 GCAAAAGCAGGTTGCATGCTCAATGATTTCACTCCTACCGGGGTTTCG--CAGCTGAACC 41015 Query 25747 TGTTTGATGA 25756 | || ||||| Sbjct 41014 TCTTCGATGA 41005 >seq300 Length=47897 Score = 89.7 bits (98), Expect = 2e-13 Identities = 89/114 (78%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 16510 GAGGTAATCAGCCATCCCTCCTTCATTAAGTGCGCCAGTGTCCCACCACTGACGGGCTGA 16569 |||||||||||| |||||||| | | ||||| |||| |||||| ||||| |||||||| Sbjct 9751 GAGGTAATCAGCTATCCCTCCATATCTGAGTGCACCAGCGTCCCA-CACTGGCGGGCTGA 9693 Query 16570 ACGCATACATTAACCAGGGTTATTGATTAGCAACACCCTGATATTCAGACAGTA 16623 | | || |||||| ||| | | ||||||| | |||||||| || |||||| Sbjct 9692 ATACCTAATATAACCATGGTCAAGGCTTAGCAATATCCTGATATGCATACAGTA 9639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157032524389616