Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq4162 109 4e-19 seq3638 109 4e-19 >seq4162 Length=60589 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||||| || || ||| ||||| || ||||||||||| || | || Sbjct 57207 AGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGT 57266 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || ||||| || || || || || ||||| || | || | || ||| Sbjct 57267 CCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCC 57326 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| ||| | | || ||||| ||||| || |||| || Sbjct 57327 TTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTT 57386 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||||| || ||||||||||| ||||| ||||| Sbjct 57387 ATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 57424 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || |||||||| || ||||| || || ||| ||| | Sbjct 56979 AGACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTA 57038 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||||||| || || || |||||||| || || | |||| || || Sbjct 57039 CCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCT 57098 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || || || || |||| || Sbjct 57099 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTG 57158 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||||| |||||| || ||||| ||||| Sbjct 57159 ATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 57196 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || ||||| || ||| |||||| || || || || || || | ||| Sbjct 57435 AGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTTCTT 57494 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | || ||||| || || || || ||||| || || | |||| |||||| Sbjct 57495 CCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCC 57554 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | ||||| || |||||||| | || Sbjct 57555 TTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTT 57614 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| |||| ||| || || || |||||||| Sbjct 57615 ATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCAT 57652 >seq3638 Length=67878 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||||| || || ||| ||||| || ||||||||||| || | || Sbjct 11858 AGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGT 11917 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || ||||| || || || || || ||||| || | || | || ||| Sbjct 11918 CCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCC 11977 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| ||| | | || ||||| ||||| || |||| || Sbjct 11978 TTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTT 12037 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||||| || ||||||||||| ||||| ||||| Sbjct 12038 ATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 12075 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || |||||||| || ||||| || || ||| ||| | Sbjct 11630 AGACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTA 11689 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||||||| || || || |||||||| || || | |||| || || Sbjct 11690 CCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCT 11749 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || || || || |||| || Sbjct 11750 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTG 11809 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||||| |||||| || ||||| ||||| Sbjct 11810 ATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 11847 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || ||||| || ||| |||||| || || || || || || | ||| Sbjct 12086 AGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTTCTT 12145 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | || ||||| || || || || ||||| || || | |||| |||||| Sbjct 12146 CCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCC 12205 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | ||||| || |||||||| | || Sbjct 12206 TTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTT 12265 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| |||| ||| || || || |||||||| Sbjct 12266 ATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCAT 12303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380895091649388