Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5471 212 3e-50 seq2246 89.7 3e-13 >seq5471 Length=104876 Score = 212 bits (234), Expect = 3e-50 Identities = 418/611 (68%), Gaps = 13/611 (2%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||||||||| || ||||| | |||||| |||||||| | || | ||| ||||| Sbjct 20130 CATAAATAAATCCGGGATCCATAGTGCATAGAATAAATCACGAGCGCGATGTTCATCTTT 20189 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||| ||| | ||||||| || ||||| ||||||| ||||| |||||||| || Sbjct 20190 GCCTGTATTTTTTCTCAGATCTAGAAATTCAAATATATCTGCATGCCAAGGTTCTAAGTA 20249 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 ||| ||||| || |||||| ||||||||||| || |||||||| || | ||| Sbjct 20250 GATTGCAAATGCTCCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCTGTATTATT 20309 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||||||| | | ||||||| | ||| |||||| ||| || | || | || | | Sbjct 20310 GAAAACTCTAAGAATTGGAATAAGACCATTTGAAATTCCATTGTTACTTTTTATTCTAGT 20369 Query 26173 TCCTGTCGATCTAATATCGTGAGCA-TGAATACCGATTCCACCAGCCCATTTTGAAATAG 26231 ||||| | ||| |||| |||||| | ||| || |||||||||||| ||| || Sbjct 20370 TCCTGCAGCTCTGATATTATGAGCACTCAAT-CCAATTCCACCAGCCGTTTTACTGATTA 20428 Query 26232 CTGCACA-ATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAAT 26290 ||||| ||| | | ||||| ||||||||| || || || | ||||| | Sbjct 20429 AAGCACATCTCTTCATC-GTATCATAAATTCCTTGAATACTGTCTTCAATCATTGTGAGC 20487 Query 26291 AAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCA 26350 ||||||||| || | ||| | || | || | ||| | |||||||| ||| Sbjct 20488 AAAAAACAACTCGACATTTGTTGTCTCTTAGTACATGCAGAAAAAAGTGTCGGTGATGCA 20547 Query 26351 TGAGTATAATATCCTTCACTCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAA 26410 ||||| ||||| |||| || | | || ||||||| ||| |||||| |||| Sbjct 20548 TGAGTGAAATATTTTTCAGACATATAATTGTATGTTTCAATCACTCGATCGATGTTGTCT 20607 Query 26411 TTACTAACTTCAATAGCTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATT---A 26467 | | || ||| ||| | | | |||||| |||||||| ||||| | || | Sbjct 20608 TCATGAATACCAACAGCGACGCGCATCAACATATGTTGAGGTCTTTCAACGATCTTGCCA 20667 Query 26468 TTTTCCGCATCTCTAATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGA 26527 ||| || | | | ||||||| | |||| |||||||| || |||||||||| || | Sbjct 20668 TTT-----AT-TTTCAGCAAATAACTTCTTTCCAAAGTTTTGAAACCAAAATAATTATAA 20721 Query 26528 TTGAAATCTCT 26538 ||| ||||||| Sbjct 20722 TTGTAATCTCT 20732 Score = 113 bits (124), Expect = 2e-20 Identities = 350/537 (65%), Gaps = 11/537 (2%) Strand=Plus/Plus Query 24649 ATTTTCTTTT-TCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAAT 24707 |||||| ||| || | |||||||| | || | |||||||||||||| | |||| Sbjct 18875 ATTTTCGTTTATCAACAGTAAATTGAATGGCATTAGCAGCTGGTTTAGTTCTCAAGTAAT 18934 Query 24708 ACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAA 24767 ||||||| |||||||| | |||| |||||||| |||||||| |||| | ||| Sbjct 18935 ACATTCCTGTTTTCAAACCAATACTCCATCCGTAAAAGTGCATTGAAGTTAATACGCCAA 18994 Query 24768 T----GTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGT 24823 | ||| | | | || | || | ||||| | ||| || || || | Sbjct 18995 CAGACGGTTGAGCAATGTGAACA----TTAAGTGATTGTGATTGATCAATGAATGGTCCT 19050 Query 24824 CTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTC 24883 | |||||| || | | | || || ||| ||||| || || | ||||| ||| Sbjct 19051 CGATCTGCTGCCATTTTTAAAATAGTCTTCTGTGATATTTCCCAAACAGTTTTATATAAA 19110 Query 24884 TCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGA 24943 ||||| ||| ||||| ||| |||||||| || || ||||| | | | ||| Sbjct 19111 GGTTTTAGTTCATCTGGAAAACTCTTGATATTTTGTACAGAACCATTAT-TGGCGATAAT 19169 Query 24944 TTCAATCT-CATATTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTT 25002 |||| | | ||| || |||||||| || | |||| | | ||| || Sbjct 19170 TTCATTTTTCATCTTTTCATCCCAAAGATCGCGTTCACTTAAATCTTTTAACAAATGAGG 19229 Query 25003 ATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGG 25062 ||| | || |||||| || || || || |||| | | || | || | || Sbjct 19230 ATTAACAATCTGAAATTCACCGGATAATACCCTTCGGGCATAAACATTGGTGGTATACGG 19289 Query 25063 TTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTAT 25122 |||| | |||||||||||||||| ||||| | || || ||||||||||| |||||| Sbjct 19290 TTCAGTAGATTCATTATTTCCTAAAATTTGTGCTGTTGAAGCTGTTGGCATCGGTGCTAT 19349 Query 25123 TAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 | || |||||||| | |||| ||| | |||| | || |||||||| |||||||| Sbjct 19350 AAGAAGTGAATTTCTGATACCAAATTCAGCAATTTTTTTCTTTAATTTCTCCCAATC 19406 >seq2246 Length=30680 Score = 89.7 bits (98), Expect = 3e-13 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| |||||||| ||||||| | || |||| || | |||| |||||||| Sbjct 26838 CATAAACAAATCTGGGATCCACAGCCCGTAGAATAGTTCCCGTGCTCGATACTCTTCTTT 26779 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 ||| ||| |||||||| | ||| | | || || |||||||| ||||| ||||| | | Sbjct 26778 TCCAGTG-TTCTTTTTCAAATCAAGTACGTCCAATATATCTGAATGCCAGGGTTCAATGT 26720 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 | |||||||| || |||||| ||| ||| || |||| | || || | || Sbjct 26719 AAATAGCAAATGCGCCGGGTCTTTTGTTGCCAAATTGCTCGACGTGGCGCGCTGTATTAT 26660 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATC 26167 |||| || || |||||| ||||| ||| | || | || || || || || ||| Sbjct 26659 TGAACACACGCAGCATTGGCACTAAACCATTCGATACACCATTGGTACTCTGTATC 26604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253011763582700